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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G49400   Transducin/WD40 repeat-like superfamily protein 
 ath-u.5   AT3G49400   Transducin/WD40 repeat-like superfamily protein 
 ath-r.7   AT3G49400   Transducin/WD40 repeat-like superfamily protein 
 ath-e.2   AT3G49400   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.bio   AT3G49400   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.hor   AT3G49400   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.lig   AT3G49400   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.str   AT3G49400   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.tis   AT3G49400   Transducin/WD40 repeat-like superfamily protein 
 bra-r.6   103875310   uncharacterized LOC103875310 
 bna-r.1   106360569   uncharacterized LOC106360569 
 bna-r.1   106424079   uncharacterized LOC106424079 
 ghi-r.1   107909462   uncharacterized LOC107909462 
 ghi-r.1   107947722   uncharacterized LOC107947722 
 cit-r.1   102610145   uncharacterized LOC102610145 
 gma-u.5   100816957   uncharacterized LOC100816957 
 gma-u.5   100804583   uncharacterized LOC100804583 
 vvi-u.5   100853102   uncharacterized LOC100853102 
 mtr-u.5   11436891   uncharacterized LOC11436891 
 mtr-u.5   11420781   uncharacterized LOC11420781 
 sly-u.5   101266425   uncharacterized LOC101266425 
 sot-r.1   102589284   uncharacterized LOC102589284 
 nta-r.1   107813969   uncharacterized LOC107813969 
 nta-r.1   107826060   uncharacterized LOC107826060 
 osa-u.5   4326934   uncharacterized LOC4326934 
 zma-u.5   103644250   uncharacterized LOC103644250 
 zma-u.5   100279901   uncharacterized LOC100279901 
 tae-r.2   123138251   uncharacterized LOC123138251 
 tae-r.2   123110168   uncharacterized LOC123110168 
 hvu-r.1   123395446   uncharacterized LOC123395446 
 hvu-r.1   123453172   uncharacterized LOC123453172 
 sbi-r.1   8057372   uncharacterized LOC8057372 
 bdi-r.1   100827917   uncharacterized LOC100827917 
 cre-r.1   CHLRE_08g386000v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G49400 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G49400 (ath-m.9 coexpression data)

CoexMap"824102"


athAT3G49400 | Entrez gene ID : 824102      
Species ath bra bna ghi cit gma vvi mtr sly sot nta osa zma tae hvu sbi bdi cre ppo
Paralog 9 1 2 2 1 2 1 2 1 1 2 1 2 2 2 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006384 [list] [network] transcription initiation at RNA polymerase III promoter  (8 genes)  IEA  
GO CC
GO:0000127 [list] [network] transcription factor TFIIIC complex  (4 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0004402 [list] [network] histone acetyltransferase activity  (26 genes)  IEA  
Protein NP_001190040.1 [sequence] [blastp]
NP_001327046.1 [sequence] [blastp]
NP_001327047.1 [sequence] [blastp]
NP_190509.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  chlo_mito 2,  cyto 1,  plas 1,  cysk_nucl 1,  cyto_plas 1  (predict for NP_001190040.1)
chlo 5,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_001327046.1)
nucl 9  (predict for NP_001327047.1)
chlo 4,  nucl 2,  chlo_mito 2,  cyto 1,  plas 1,  cysk_nucl 1,  cyto_plas 1  (predict for NP_190509.2)
Subcellular
localization
TargetP
other 3  (predict for NP_001190040.1)
other 3  (predict for NP_001327046.1)
other 8  (predict for NP_001327047.1)
other 3  (predict for NP_190509.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G49400
ath-u.5
for
AT3G49400
ath-r.7
for
AT3G49400
ath-e.2
for
AT3G49400
ath-m.4.bio
for
AT3G49400
ath-m.4.hor
for
AT3G49400
ath-m.4.lig
for
AT3G49400
ath-m.4.str
for
AT3G49400
ath-m.4.tis
for
AT3G49400
bra-r.6
for
103875310
bna-r.1
for
106360569
bna-r.1
for
106424079
ghi-r.1
for
107909462
ghi-r.1
for
107947722
cit-r.1
for
102610145
gma-u.5
for
100816957
gma-u.5
for
100804583
vvi-u.5
for
100853102
mtr-u.5
for
11436891
mtr-u.5
for
11420781
sly-u.5
for
101266425
sot-r.1
for
102589284
nta-r.1
for
107813969
nta-r.1
for
107826060
osa-u.5
for
4326934
zma-u.5
for
103644250
zma-u.5
for
100279901
tae-r.2
for
123138251
tae-r.2
for
123110168
hvu-r.1
for
123395446
hvu-r.1
for
123453172
sbi-r.1
for
8057372
bdi-r.1
for
100827917
cre-r.1
for
CHLRE_08g386000v5


Ortholog ID: 6580
Species ath bra bna bna ghi ghi cit gma gma vvi mtr mtr sly sot nta nta osa zma zma tae tae hvu hvu sbi bdi cre
Symbol AT3G49400 LOC103875310 LOC106360569 LOC106424079 LOC107909462 LOC107947722 LOC102610145 LOC100816957 LOC100804583 LOC100853102 LOC11436891 LOC11420781 LOC101266425 LOC102589284 LOC107813969 LOC107826060 LOC4326934 LOC103644250 LOC100279901 LOC123110168 LOC123091203 LOC123395446 LOC123453172 LOC8057372 LOC100827917 CHLRE_08g386000v5
Function* Transducin/WD40 repeat-like superfamily protein uncharacterized LOC103875310 uncharacterized LOC106360569 uncharacterized LOC106424079 uncharacterized LOC107909462 uncharacterized LOC107947722 uncharacterized LOC102610145 uncharacterized LOC100816957 uncharacterized LOC100804583 uncharacterized LOC100853102 uncharacterized LOC11436891 uncharacterized LOC11420781 uncharacterized LOC101266425 uncharacterized LOC102589284 uncharacterized LOC107813969 uncharacterized LOC107826060 uncharacterized LOC4326934 uncharacterized LOC103644250 uncharacterized LOC100279901 uncharacterized LOC123110168 uncharacterized LOC123091203 uncharacterized LOC123395446 uncharacterized LOC123453172 uncharacterized LOC8057372 uncharacterized LOC100827917 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03018 RNA degradation 3
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta04626 Plant-pathogen interaction 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
hvu03013 Nucleocytoplasmic transport 2
hvu03015 mRNA surveillance pathway 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824102 103875310 106360569 106424079 107909462 107947722 102610145 100816957 100804583 100853102 11436891 11420781 101266425 102589284 107813969 107826060 4326934 103644250 100279901 123110168 123091203 123395446 123453172 8057372 100827917 5719779
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