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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   DWF4   Cytochrome P450 superfamily protein 
 ath-u.5   DWF4   Cytochrome P450 superfamily protein 
 ath-r.7   DWF4   Cytochrome P450 superfamily protein 
 ath-e.2   DWF4   Cytochrome P450 superfamily protein 
 ath-m.4.bio   DWF4   Cytochrome P450 superfamily protein 
 ath-m.4.hor   DWF4   Cytochrome P450 superfamily protein 
 ath-m.4.lig   DWF4   Cytochrome P450 superfamily protein 
 ath-m.4.str   DWF4   Cytochrome P450 superfamily protein 
 ath-m.4.tis   DWF4   Cytochrome P450 superfamily protein 
 bra-r.6   103840968   cytochrome P450 90B1 
 bra-r.6   103828198   cytochrome P450 90B1 
 bna-r.1   125575243   cytochrome P450 90B1-like 
 bna-r.1   106447365   cytochrome P450 90B1 
 bna-r.1   106405681   cytochrome P450 90B1-like 
 ghi-r.1   107913065   cytochrome P450 90B1 
 ghi-r.1   107896149   cytochrome P450 90B1-like 
 cit-r.1   102623486   cholesterol 22-monohydroxylase CYP90B51 
 gma-u.5   100802498   cytochrome P450 90B1 
 gma-u.5   100789515   cytochrome P450 90B1 
 vvi-u.5   100241065   cholesterol 22-monohydroxylase CYP90B51 
 ppo-u.5   18101214   cholesterol 22-monohydroxylase CYP90B51 
 ppo-u.5   18099286   cholesterol 22-monohydroxylase CYP90B51 
 mtr-u.5   11408048   cytochrome P450 90B1 
 sly-u.5   CYP90B3   cytochrome P450 90B3 
 sot-r.1   102603786   cytochrome P450 90B1 
 nta-r.1   107795954   cholesterol 22-monohydroxylase CYP90B51-like 
 nta-r.1   107779615   cholesterol 22-monohydroxylase CYP90B51 
 osa-u.5   4332134   cytochrome P450 90B2-like 
 zma-u.5   100191562   putative cytochrome P450 superfamily protein 
 tae-r.2   123098154   cytochrome P450 90B2 
 tae-r.2   123092868   cytochrome P450 90B2 
 tae-r.2   123085252   cytochrome P450 90B2 
 hvu-r.1   123449233   cytochrome P450 90B2 
 sbi-r.1   8056846   cytochrome P450 90B2 
 bdi-r.1   100837605   cytochrome P450 90B2 

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Top 50 coexpressed genes to DWF4 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to DWF4 (ath-m.9 coexpression data)

CoexMap"824229"


athDWF4 | Entrez gene ID : 824229      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 2 1 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00905 [list] [network] Brassinosteroid biosynthesis (9 genes)
GO BP
GO:0010358 [list] [network] leaf shaping  (8 genes)  IMP  
GO:0016132 [list] [network] brassinosteroid biosynthetic process  (12 genes)  IMP  
GO:0009867 [list] [network] jasmonic acid mediated signaling pathway  (74 genes)  IGI  
GO:0009741 [list] [network] response to brassinosteroid  (101 genes)  IEP IMP  
GO:0009753 [list] [network] response to jasmonic acid  (202 genes)  IMP  
GO:0009826 [list] [network] unidimensional cell growth  (310 genes)  IMP  
GO:0048366 [list] [network] leaf development  (371 genes)  IMP  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (897 genes)  IDA  
GO MF
GO:0160191 [list] [network] steroid 22S-hydroxylase activity  (2 genes)  IDA  
Protein NP_001327730.1 [sequence] [blastp]
NP_190635.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cyto_E.R. 3,  plas 2,  nucl 1,  cysk_plas 1  (predict for NP_001327730.1)
cyto 4,  cyto_E.R. 3,  plas 2,  nucl 1,  E.R. 1,  golg_plas 1,  cysk_plas 1,  mito_plas 1  (predict for NP_190635.1)
Subcellular
localization
TargetP
scret 6  (predict for NP_001327730.1)
scret 6  (predict for NP_190635.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
DWF4
ath-u.5
for
DWF4
ath-r.7
for
DWF4
ath-e.2
for
DWF4
ath-m.4.bio
for
DWF4
ath-m.4.hor
for
DWF4
ath-m.4.lig
for
DWF4
ath-m.4.str
for
DWF4
ath-m.4.tis
for
DWF4
bra-r.6
for
103840968
bra-r.6
for
103828198
bna-r.1
for
125575243
bna-r.1
for
106447365
bna-r.1
for
106405681
ghi-r.1
for
107913065
ghi-r.1
for
107896149
cit-r.1
for
102623486
gma-u.5
for
100802498
gma-u.5
for
100789515
vvi-u.5
for
100241065
ppo-u.5
for
18101214
ppo-u.5
for
18099286
mtr-u.5
for
11408048
sly-u.5
for
CYP90B3
sot-r.1
for
102603786
nta-r.1
for
107795954
nta-r.1
for
107779615
osa-u.5
for
4332134
zma-u.5
for
100191562
tae-r.2
for
123098154
tae-r.2
for
123092868
tae-r.2
for
123085252
hvu-r.1
for
123449233
sbi-r.1
for
8056846
bdi-r.1
for
100837605


Ortholog ID: 6897
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae hvu sbi bdi
Symbol DWF4 LOC103840968 LOC103828198 LOC125575243 LOC106447365 LOC106405681 LOC107913065 LOC107896149 LOC102623486 LOC100802498 LOC100789515 LOC100241065 LOC18101214 LOC18099286 LOC11408048 CYP90B3 LOC102603786 LOC107795954 LOC107779615 LOC4332134 LOC100191562 LOC123098154 LOC123449233 LOC8056846 LOC100837605
Function* Cytochrome P450 superfamily protein cytochrome P450 90B1 cytochrome P450 90B1 cytochrome P450 90B1-like cytochrome P450 90B1 cytochrome P450 90B1-like cytochrome P450 90B1 cytochrome P450 90B1-like cholesterol 22-monohydroxylase CYP90B51 cytochrome P450 90B1 cytochrome P450 90B1 cholesterol 22-monohydroxylase CYP90B51 cholesterol 22-monohydroxylase CYP90B51 cholesterol 22-monohydroxylase CYP90B51 cytochrome P450 90B1 cytochrome P450 90B3 cytochrome P450 90B1 cholesterol 22-monohydroxylase CYP90B51-like cholesterol 22-monohydroxylase CYP90B51 cytochrome P450 90B2-like putative cytochrome P450 superfamily protein cytochrome P450 90B2 cytochrome P450 90B2 cytochrome P450 90B2 cytochrome P450 90B2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00905 Brassinosteroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
bra03040 Spliceosome 2
bra04141 Protein processing in endoplasmic reticulum 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00905 Brassinosteroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00905 Brassinosteroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00905 Brassinosteroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi04075 Plant hormone signal transduction 2
ghi00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi04075 Plant hormone signal transduction 2
ghi00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00620 Pyruvate metabolism 2
ppo00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00040 Pentose and glucuronate interconversions 2
ppo00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 7
sly04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 2
sot00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 5
nta00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00905 Brassinosteroid biosynthesis 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
sbi04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824229 103840968 103828198 125575243 106447365 106405681 107913065 107896149 102623486 100802498 100789515 100241065 18101214 18099286 11408048 101256342 102603786 107795954 107779615 4332134 100191562 123098154 123449233 8056846 100837605
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