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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G54390   sequence-specific DNA binding transcription factor 
 ath-u.5   AT3G54390   sequence-specific DNA binding transcription factor 
 ath-r.7   AT3G54390   sequence-specific DNA binding transcription factor 
 ath-e.2   AT3G54390   sequence-specific DNA binding transcription factor 
 ath-m.4.bio   AT3G54390   sequence-specific DNA binding transcription factor 
 ath-m.4.hor   AT3G54390   sequence-specific DNA binding transcription factor 
 ath-m.4.lig   AT3G54390   sequence-specific DNA binding transcription factor 
 ath-m.4.str   AT3G54390   sequence-specific DNA binding transcription factor 
 ath-m.4.tis   AT3G54390   sequence-specific DNA binding transcription factor 
 bra-r.6   103841352   trihelix transcription factor ASIL1 
 bna-r.1   106416300   trihelix transcription factor ASIL1 
 bna-r.1   106411979   trihelix transcription factor ASIL1-like 
 ghi-r.1   107897025   trihelix transcription factor ASIL1 
 ghi-r.1   107915123   trihelix transcription factor ASIL2 
 ghi-r.1   107927601   trihelix transcription factor ASIL2 
 cit-r.1   102631091   trihelix transcription factor ENAP1 
 gma-u.5   100813972   trihelix transcription factor ASIL2 
 gma-u.5   100799917   trihelix transcription factor ASIL2 
 gma-u.5   100793978   trihelix transcription factor ASIL1 
 vvi-u.5   100267221   trihelix transcription factor ENAP2 
 vvi-u.5   100254951   trihelix transcription factor ENAP1 
 ppo-u.5   7460246   trihelix transcription factor ASIL2 
 ppo-u.5   7486995   trihelix transcription factor ASIL1 
 mtr-u.5   25482836   trihelix transcription factor ASIL1 
 mtr-u.5   11429189   trihelix transcription factor ASIL1 
 sly-u.5   101266671   trihelix transcription factor ASIL2 
 sot-r.1   102584731   trihelix transcription factor ASIL2 
 nta-r.1   107806161   uncharacterized LOC107806161 
 nta-r.1   107775513   uncharacterized LOC107775513 
 osa-u.5   4347833   trihelix transcription factor ENAP1 
 zma-u.5   103647652   sequence-specific DNA binding transcription factor 
 zma-u.5   103633124   trihelix transcription factor ASIL1 
 tae-r.2   123113085   trihelix transcription factor ASIL2 
 tae-r.2   123122603   trihelix transcription factor ASIL1 
 tae-r.2   123104800   trihelix transcription factor ASIL2 
 hvu-r.1   123397999   uncharacterized LOC123397999 
 hvu-r.1   123451963   trihelix transcription factor ASIL2-like 
 sbi-r.1   110432904   trihelix transcription factor ASIL2-like 
 bdi-r.1   100839457   trihelix transcription factor ASIL1 

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Top 50 coexpressed genes to AT3G54390 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G54390 (ath-m.9 coexpression data)

CoexMap"824605"


athAT3G54390 | Entrez gene ID : 824605      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 3 1 3 2 2 2 1 1 2 1 2 3 2 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001327946.1 [sequence] [blastp]
NP_191007.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  nucl_plas 4,  cyto 2,  chlo 1,  plas 1,  extr 1  (predict for NP_001327946.1)
nucl 5,  nucl_plas 4,  mito 3,  plas 1  (predict for NP_191007.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001327946.1)
other 8,  chlo 4  (predict for NP_191007.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G54390
ath-u.5
for
AT3G54390
ath-r.7
for
AT3G54390
ath-e.2
for
AT3G54390
ath-m.4.bio
for
AT3G54390
ath-m.4.hor
for
AT3G54390
ath-m.4.lig
for
AT3G54390
ath-m.4.str
for
AT3G54390
ath-m.4.tis
for
AT3G54390
bra-r.6
for
103841352
bna-r.1
for
106416300
bna-r.1
for
106411979
ghi-r.1
for
107897025
ghi-r.1
for
107915123
ghi-r.1
for
107927601
cit-r.1
for
102631091
gma-u.5
for
100813972
gma-u.5
for
100799917
gma-u.5
for
100793978
vvi-u.5
for
100267221
vvi-u.5
for
100254951
ppo-u.5
for
7460246
ppo-u.5
for
7486995
mtr-u.5
for
25482836
mtr-u.5
for
11429189
sly-u.5
for
101266671
sot-r.1
for
102584731
nta-r.1
for
107806161
nta-r.1
for
107775513
osa-u.5
for
4347833
zma-u.5
for
103647652
zma-u.5
for
103633124
tae-r.2
for
123113085
tae-r.2
for
123122603
tae-r.2
for
123104800
hvu-r.1
for
123397999
hvu-r.1
for
123451963
sbi-r.1
for
110432904
bdi-r.1
for
100839457


Ortholog ID: 6904
Species ath bra bna bna ghi ghi ghi cit gma gma gma vvi vvi ppo ppo mtr mtr sly sot nta nta osa zma zma tae tae tae hvu hvu sbi bdi
Symbol AT3G54390 LOC103841352 LOC106416300 LOC106411979 LOC107897025 LOC107915123 LOC107927601 LOC102631091 LOC100813972 LOC100793978 LOC100784245 LOC100267221 LOC100254951 LOC7460246 LOC7486995 LOC25482836 LOC11429189 LOC101266671 LOC102584731 LOC107806161 LOC107775513 LOC4347833 LOC103647652 LOC103633124 LOC123113085 LOC123122603 LOC123104800 LOC123397999 LOC123451963 LOC110432904 LOC100839457
Function* sequence-specific DNA binding transcription factor trihelix transcription factor ASIL1 trihelix transcription factor ASIL1 trihelix transcription factor ASIL1-like trihelix transcription factor ASIL1 trihelix transcription factor ASIL2 trihelix transcription factor ASIL2 trihelix transcription factor ENAP1 trihelix transcription factor ASIL2 trihelix transcription factor ASIL1 trihelix transcription factor ASIL1 trihelix transcription factor ENAP2 trihelix transcription factor ENAP1 trihelix transcription factor ASIL2 trihelix transcription factor ASIL1 trihelix transcription factor ASIL1 trihelix transcription factor ASIL1 trihelix transcription factor ASIL2 trihelix transcription factor ASIL2 uncharacterized LOC107806161 uncharacterized LOC107775513 trihelix transcription factor ENAP1 sequence-specific DNA binding transcription factor trihelix transcription factor ASIL1 trihelix transcription factor ASIL2 trihelix transcription factor ASIL1 trihelix transcription factor ASIL2 uncharacterized LOC123397999 trihelix transcription factor ASIL2-like trihelix transcription factor ASIL2-like trihelix transcription factor ASIL1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma02010 ABC transporters 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 2
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 5
nta03083 Polycomb repressive complex 4
nta04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 4
osa02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 3
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 3
hvu04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824605 103841352 106416300 106411979 107897025 107915123 107927601 102631091 100813972 100793978 100784245 100267221 100254951 7460246 7486995 25482836 11429189 101266671 102584731 107806161 107775513 4347833 103647652 103633124 123113085 123122603 123104800 123397999 123451963 110432904 100839457
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