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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G55640   Mitochondrial substrate carrier family protein 
 ath-u.5   AT3G55640   Mitochondrial substrate carrier family protein 
 ath-r.7   AT3G55640   Mitochondrial substrate carrier family protein 
 ath-e.2   AT3G55640   Mitochondrial substrate carrier family protein 
 ath-m.4.bio   AT3G55640   Mitochondrial substrate carrier family protein 
 ath-m.4.hor   AT3G55640   Mitochondrial substrate carrier family protein 
 ath-m.4.lig   AT3G55640   Mitochondrial substrate carrier family protein 
 ath-m.4.str   AT3G55640   Mitochondrial substrate carrier family protein 
 ath-m.4.tis   AT3G55640   Mitochondrial substrate carrier family protein 
 ath-u.5   AT2G37890   Mitochondrial substrate carrier family protein 
 ath-u.5   AT3G53940   Mitochondrial substrate carrier family protein 
 bra-r.6   103841475   mitochondrial substrate carrier family protein B 
 bra-r.6   103865633   mitochondrial substrate carrier family protein B 
 bra-r.6   103857743   mitochondrial substrate carrier family protein B 
 bna-r.1   106402643   mitochondrial substrate carrier family protein B 
 bna-r.1   106398874   mitochondrial substrate carrier family protein B-like 
 bna-r.1   106360789   mitochondrial substrate carrier family protein B-like 
 ghi-r.1   107936667   mitochondrial substrate carrier family protein B 
 ghi-r.1   107935339   mitochondrial substrate carrier family protein B 
 ghi-r.1   107891081   mitochondrial substrate carrier family protein B 
 cit-r.1   102618151   uncharacterized LOC102618151 
 cit-r.1   102611606   uncharacterized LOC102611606 
 gma-u.5   100801749   mitochondrial substrate carrier family protein B 
 gma-u.5   100788060   mitochondrial substrate carrier family protein B 
 gma-u.5   100777563   mitochondrial substrate carrier family protein B 
 vvi-u.5   100244349   uncharacterized LOC100244349 
 vvi-u.5   100265022   uncharacterized LOC100265022 
 ppo-u.5   7468021   uncharacterized LOC7468021 
 ppo-u.5   7486532   uncharacterized LOC7486532 
 ppo-u.5   7487984   uncharacterized LOC7487984 
 mtr-u.5   11413479   mitochondrial substrate carrier family protein B 
 mtr-u.5   11406696   mitochondrial substrate carrier family protein B 
 sly-u.5   101246369   uncharacterized LOC101246369 
 sot-r.1   102590091   mitochondrial substrate carrier family protein B-like 
 sot-r.1   102591065   mitochondrial substrate carrier family protein B-like 
 nta-r.1   107805565   uncharacterized LOC107805565 
 nta-r.1   107807345   uncharacterized LOC107807345 
 nta-r.1   107806085   uncharacterized LOC107806085 
 osa-u.5   4332367   uncharacterized LOC4332367 
 osa-u.5   4325457   uncharacterized LOC4325457 
 zma-u.5   100193567   uncharacterized LOC100193567 
 zma-u.5   100193742   uncharacterized LOC100193742 
 tae-r.2   123068525   mitochondrial substrate carrier family protein B 
 tae-r.2   123060047   mitochondrial substrate carrier family protein B 
 tae-r.2   123077028   mitochondrial substrate carrier family protein B 
 hvu-r.1   123442632   mitochondrial substrate carrier family protein B-like 
 hvu-r.1   123449053   mitochondrial substrate carrier family protein V-like 
 sbi-r.1   8073320   mitochondrial substrate carrier family protein B 
 sbi-r.1   8083694   serine/arginine repetitive matrix protein 1 
 sbi-r.1   8084953   mitochondrial substrate carrier family protein B 
 bdi-r.1   100840253   mitochondrial substrate carrier family protein B 
 bdi-r.1   100824595   mitochondrial substrate carrier family protein B 

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Top 50 coexpressed genes to AT3G55640 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G55640 (ath-m.9 coexpression data)

CoexMap"824730"


athAT3G55640 | Entrez gene ID : 824730      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 11 3 3 3 2 3 2 3 2 1 2 3 2 2 3 2 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0055085 [list] [network] transmembrane transport  (543 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_001319759.1 [sequence] [blastp]
NP_001327527.1 [sequence] [blastp]
NP_001327528.1 [sequence] [blastp]
NP_191123.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  mito 1,  cysk 1,  cysk_nucl 1  (predict for NP_001319759.1)
chlo 10  (predict for NP_001327527.1)
chlo 10  (predict for NP_001327528.1)
chlo 8,  nucl 1,  mito 1,  cysk 1,  cysk_nucl 1  (predict for NP_191123.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for NP_001319759.1)
chlo 4,  other 3  (predict for NP_001327527.1)
chlo 4,  other 3  (predict for NP_001327528.1)
chlo 4,  other 3  (predict for NP_191123.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G55640
ath-u.5
for
AT3G55640
ath-r.7
for
AT3G55640
ath-e.2
for
AT3G55640
ath-m.4.bio
for
AT3G55640
ath-m.4.hor
for
AT3G55640
ath-m.4.lig
for
AT3G55640
ath-m.4.str
for
AT3G55640
ath-m.4.tis
for
AT3G55640
ath-u.5
for
AT2G37890
ath-u.5
for
AT3G53940
bra-r.6
for
103841475
bra-r.6
for
103865633
bra-r.6
for
103857743
bna-r.1
for
106402643
bna-r.1
for
106398874
bna-r.1
for
106360789
ghi-r.1
for
107936667
ghi-r.1
for
107935339
ghi-r.1
for
107891081
cit-r.1
for
102618151
cit-r.1
for
102611606
gma-u.5
for
100801749
gma-u.5
for
100788060
gma-u.5
for
100777563
vvi-u.5
for
100244349
vvi-u.5
for
100265022
ppo-u.5
for
7468021
ppo-u.5
for
7486532
ppo-u.5
for
7487984
mtr-u.5
for
11413479
mtr-u.5
for
11406696
sly-u.5
for
101246369
sot-r.1
for
102590091
sot-r.1
for
102591065
nta-r.1
for
107805565
nta-r.1
for
107807345
nta-r.1
for
107806085
osa-u.5
for
4332367
osa-u.5
for
4325457
zma-u.5
for
100193567
zma-u.5
for
100193742
tae-r.2
for
123068525
tae-r.2
for
123060047
tae-r.2
for
123077028
hvu-r.1
for
123442632
hvu-r.1
for
123449053
sbi-r.1
for
8073320
sbi-r.1
for
8083694
sbi-r.1
for
8084953
bdi-r.1
for
100840253
bdi-r.1
for
100824595


Ortholog ID: 2707
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi
Symbol AT3G55640 AT2G37890 AT3G53940 LOC103841475 LOC103865633 LOC103857743 LOC106380600 LOC106447413 LOC106427714 LOC107936667 LOC107935339 LOC107891081 LOC102618151 LOC102611606 LOC100788060 LOC100777563 LOC100813211 LOC100244349 LOC100265022 LOC7486532 LOC7487984 LOC7490365 LOC11413479 LOC11406696 LOC101246369 LOC102590091 LOC102591065 LOC107805565 LOC107807345 LOC107806085 LOC4332367 LOC4325457 LOC100193567 LOC100193742 LOC123060047 LOC123085400 LOC123097943 LOC123442632 LOC123449053 LOC8073320 LOC8083694 LOC8084953 LOC100840253 LOC100824595
Function* Mitochondrial substrate carrier family protein Mitochondrial substrate carrier family protein Mitochondrial substrate carrier family protein mitochondrial substrate carrier family protein B mitochondrial substrate carrier family protein B mitochondrial substrate carrier family protein B mitochondrial substrate carrier family protein B mitochondrial substrate carrier family protein B mitochondrial substrate carrier family protein B mitochondrial substrate carrier family protein B mitochondrial substrate carrier family protein B mitochondrial substrate carrier family protein B uncharacterized LOC102618151 uncharacterized LOC102611606 mitochondrial substrate carrier family protein B mitochondrial substrate carrier family protein B mitochondrial substrate carrier family protein B uncharacterized LOC100244349 uncharacterized LOC100265022 uncharacterized LOC7486532 uncharacterized LOC7487984 uncharacterized LOC7490365 mitochondrial substrate carrier family protein B mitochondrial substrate carrier family protein B uncharacterized LOC101246369 mitochondrial substrate carrier family protein B-like mitochondrial substrate carrier family protein B-like uncharacterized LOC107805565 uncharacterized LOC107807345 uncharacterized LOC107806085 uncharacterized LOC4332367 uncharacterized LOC4325457 uncharacterized LOC100193567 uncharacterized LOC100193742 mitochondrial substrate carrier family protein B mitochondrial substrate carrier family protein V mitochondrial substrate carrier family protein V mitochondrial substrate carrier family protein B-like mitochondrial substrate carrier family protein V-like mitochondrial substrate carrier family protein B serine/arginine repetitive matrix protein 1 mitochondrial substrate carrier family protein B mitochondrial substrate carrier family protein B mitochondrial substrate carrier family protein B
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03018 RNA degradation 3
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma00730 Thiamine metabolism 2
gma01232 Nucleotide metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 2
gma04981 Folate transport and metabolism 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00730 Thiamine metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
sbi00561 Glycerolipid metabolism 2
sbi00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824730 818365 824561 103841475 103865633 103857743 106380600 106447413 106427714 107936667 107935339 107891081 102618151 102611606 100788060 100777563 100813211 100244349 100265022 7486532 7487984 7490365 11413479 11406696 101246369 102590091 102591065 107805565 107807345 107806085 4332367 4325457 100193567 100193742 123060047 123085400 123097943 123442632 123449053 8073320 8083694 8084953 100840253 100824595
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