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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   FER3   ferritin 3 
 ath-u.5   FER3   ferritin 3 
 ath-r.7   FER3   ferritin 3 
 ath-e.2   FER3   ferritin 3 
 ath-m.4.bio   FER3   ferritin 3 
 ath-m.4.hor   FER3   ferritin 3 
 ath-m.4.lig   FER3   ferritin 3 
 ath-m.4.str   FER3   ferritin 3 
 ath-m.4.tis   FER3   ferritin 3 
 ath-u.5   FER2   ferritin 2 
 ath-u.5   FER1   ferretin 1 
 ath-u.5   FER4   ferritin 4 
 bra-r.6   103830031   ferritin-3, chloroplastic 
 bra-r.6   103841515   ferritin-3, chloroplastic 
 bra-r.6   103855410   ferritin-1, chloroplastic 
 bna-r.1   106452550   ferritin-2, chloroplastic 
 bna-r.1   111200606   ferritin-3, chloroplastic-like 
 bna-r.1   106433816   ferritin-1, chloroplastic 
 ghi-r.1   121207892   ferritin-3, chloroplastic 
 ghi-r.1   107937064   ferritin-3, chloroplastic 
 ghi-r.1   107931829   ferritin-3, chloroplastic 
 cit-r.1   102615169   ferritin-3, chloroplastic 
 cit-r.1   102626899   ferritin-3, chloroplastic 
 gma-u.5   FER2-1   ferritin 
 gma-u.5   100778273   ferritin-2, chloroplastic 
 vvi-u.5   100267235   ferritin-3, chloroplastic 
 ppo-u.5   7462089   ferritin-3, chloroplastic 
 ppo-u.5   7460396   ferritin, chloroplastic 
 ppo-u.5   7474413   ferritin-3, chloroplastic 
 mtr-u.5   11412329   ferritin-1, chloroplastic 
 mtr-u.5   11421063   ferritin-2, chloroplastic 
 mtr-u.5   11428040   ferritin-3, chloroplastic 
 sly-u.5   104647958   ferritin-1, chloroplastic 
 sly-u.5   101260346   ferritin-2, chloroplastic 
 sot-r.1   102577492   ferritin 
 sot-r.1   102577652   ferritin-3, chloroplastic 
 sot-r.1   102581985   ferritin-2, chloroplastic-like 
 nta-r.1   107832545   ferritin-2, chloroplastic 
 nta-r.1   107809228   ferritin-2, chloroplastic-like 
 nta-r.1   107801146   ferritin-1, chloroplastic-like 
 osa-u.5   9269178   ferritin-1, chloroplastic 
 osa-u.5   4351264   ferritin-1, chloroplastic 
 zma-u.5   542392   ferritin homolog 2 
 zma-u.5   542553   ferritin 1 
 tae-r.2   100270664   ferritin-1, chloroplastic 
 tae-r.2   100270662   ferritin-1, chloroplastic 
 tae-r.2   100270663   ferritin-1, chloroplastic 
 hvu-r.1   123395254   ferritin-1, chloroplastic-like 
 hvu-r.1   123448137   ferritin-1, chloroplastic-like 
 sbi-r.1   110435665   ferritin-1, chloroplastic-like 
 sbi-r.1   110437661   ferritin-1, chloroplastic 
 bdi-r.1   100837024   ferritin-1, chloroplastic 
 cre-r.1   CHLRE_09g387800v5   uncharacterized protein 

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Top 50 coexpressed genes to FER3 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to FER3 (ath-m.9 coexpression data)

CoexMap"824775"


athFER3 | Entrez gene ID : 824775      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 12 3 3 3 2 2 1 3 3 2 3 3 2 2 3 2 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00860 [list] [network] Porphyrin metabolism (57 genes)
GO BP
GO:0006826 [list] [network] iron ion transport  (28 genes)  IGI  
GO:0010039 [list] [network] response to iron ion  (28 genes)  IEP  
GO:0060586 [list] [network] multicellular organismal-level iron ion homeostasis  (29 genes)  IGI  
GO:0000302 [list] [network] response to reactive oxygen species  (142 genes)  IGI  
GO:0015979 [list] [network] photosynthesis  (154 genes)  IGI  
GO:0048366 [list] [network] leaf development  (371 genes)  IGI  
GO:0009908 [list] [network] flower development  (378 genes)  IGI  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM ISS  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_191168.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  nucl_plas 3,  chlo 2,  cyto 1,  cyto_E.R. 1  (predict for NP_191168.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_191168.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
FER3
ath-u.5
for
FER3
ath-r.7
for
FER3
ath-e.2
for
FER3
ath-m.4.bio
for
FER3
ath-m.4.hor
for
FER3
ath-m.4.lig
for
FER3
ath-m.4.str
for
FER3
ath-m.4.tis
for
FER3
ath-u.5
for
FER2
ath-u.5
for
FER1
ath-u.5
for
FER4
bra-r.6
for
103830031
bra-r.6
for
103841515
bra-r.6
for
103855410
bna-r.1
for
106452550
bna-r.1
for
111200606
bna-r.1
for
106433816
ghi-r.1
for
121207892
ghi-r.1
for
107937064
ghi-r.1
for
107931829
cit-r.1
for
102615169
cit-r.1
for
102626899
gma-u.5
for
FER2-1
gma-u.5
for
100778273
vvi-u.5
for
100267235
ppo-u.5
for
7462089
ppo-u.5
for
7460396
ppo-u.5
for
7474413
mtr-u.5
for
11412329
mtr-u.5
for
11421063
mtr-u.5
for
11428040
sly-u.5
for
104647958
sly-u.5
for
101260346
sot-r.1
for
102577492
sot-r.1
for
102577652
sot-r.1
for
102581985
nta-r.1
for
107832545
nta-r.1
for
107809228
nta-r.1
for
107801146
osa-u.5
for
9269178
osa-u.5
for
4351264
zma-u.5
for
542392
zma-u.5
for
542553
tae-r.2
for
100270664
tae-r.2
for
100270662
tae-r.2
for
100270663
hvu-r.1
for
123395254
hvu-r.1
for
123448137
sbi-r.1
for
110435665
sbi-r.1
for
110437661
bdi-r.1
for
100837024
cre-r.1
for
CHLRE_09g387800v5


Ortholog ID: 2022
Species ath ath ath bra bra bna bna bna ghi ghi ghi cit cit gma vvi ppo ppo ppo mtr mtr mtr sly sly sot sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi cre
Symbol FER3 FER2 FER4 LOC103830031 LOC103855410 LOC106452550 LOC106433816 LOC106352904 LOC121207892 LOC107937064 LOC107904058 LOC102615169 LOC102626899 LOC100810000 LOC100267235 LOC7462089 LOC7460396 LOC7468070 LOC11412329 LOC11421063 LOC11428040 LOC104647958 LOC101260346 LOC102577492 LOC102577652 LOC102581985 LOC107832545 LOC107809228 LOC107801146 LOC9269178 LOC4351264 LOC542392 LOC542553 LOC100270664 LOC100270662 LOC100270663 LOC123395254 LOC123448137 LOC110435665 LOC110437661 LOC100837024 CHLRE_09g387800v5
Function* ferritin 3 ferritin 2 ferritin 4 ferritin-3, chloroplastic ferritin-1, chloroplastic ferritin-2, chloroplastic ferritin-1, chloroplastic ferritin-3, chloroplastic ferritin-3, chloroplastic ferritin-3, chloroplastic ferritin-3, chloroplastic-like ferritin-3, chloroplastic ferritin-3, chloroplastic ferritin-3, chloroplastic-like ferritin-3, chloroplastic ferritin-3, chloroplastic ferritin, chloroplastic ferritin, chloroplastic ferritin-1, chloroplastic ferritin-2, chloroplastic ferritin-3, chloroplastic ferritin-1, chloroplastic ferritin-2, chloroplastic ferritin ferritin-3, chloroplastic ferritin-2, chloroplastic-like ferritin-2, chloroplastic ferritin-2, chloroplastic-like ferritin-1, chloroplastic-like ferritin-1, chloroplastic ferritin-1, chloroplastic ferritin homolog 2 ferritin 1 ferritin-1, chloroplastic ferritin-1, chloroplastic ferritin-1, chloroplastic ferritin-1, chloroplastic-like ferritin-1, chloroplastic-like ferritin-1, chloroplastic-like ferritin-1, chloroplastic ferritin-1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 3
ath00053 Ascorbate and aldarate metabolism 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 5
ath00053 Ascorbate and aldarate metabolism 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 7
bna00010 Glycolysis / Gluconeogenesis 2
bna00620 Pyruvate metabolism 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 7
bna00010 Glycolysis / Gluconeogenesis 2
bna00620 Pyruvate metabolism 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00410 beta-Alanine metabolism 7
ghi00640 Propanoate metabolism 7
ghi00071 Fatty acid degradation 6
ghi01212 Fatty acid metabolism 6
ghi01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00010 Glycolysis / Gluconeogenesis 2
cit00710 Carbon fixation by Calvin cycle 2
cit01230 Biosynthesis of amino acids 2
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
cit01200 Carbon metabolism 2
cit00053 Ascorbate and aldarate metabolism 2
cit00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 5
vvi00010 Glycolysis / Gluconeogenesis 3
vvi00330 Arginine and proline metabolism 3
vvi01200 Carbon metabolism 3
vvi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo00860 Porphyrin metabolism 3
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo00860 Porphyrin metabolism 3
ppo02010 ABC transporters 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00860 Porphyrin metabolism 4
ppo00480 Glutathione metabolism 3
ppo02010 ABC transporters 2
ppo00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 4
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 5
mtr04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 5
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly00710 Carbon fixation by Calvin cycle 2
sly04146 Peroxisome 2
sly00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 3
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 3
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 4
sot03008 Ribosome biogenesis in eukaryotes 3
sot03013 Nucleocytoplasmic transport 3
sot03250 Viral life cycle - HIV-1 3
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 6
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00620 Pyruvate metabolism 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 3
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824775 820276 818622 103830031 103855410 106452550 106433816 106352904 121207892 107937064 107904058 102615169 102626899 100810000 100267235 7462089 7460396 7468070 11412329 11421063 11428040 104647958 101260346 102577492 102577652 102581985 107832545 107809228 107801146 9269178 4351264 542392 542553 100270664 100270662 100270663 123395254 123448137 110435665 110437661 100837024 5720015
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