Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G56330   N2,N2-dimethylguanosine tRNA methyltransferase 
 ath-u.5   AT3G56330   N2,N2-dimethylguanosine tRNA methyltransferase 
 ath-r.7   AT3G56330   N2,N2-dimethylguanosine tRNA methyltransferase 
 ath-e.2   AT3G56330   N2,N2-dimethylguanosine tRNA methyltransferase 
 ath-m.4.bio   AT3G56330   N2,N2-dimethylguanosine tRNA methyltransferase 
 ath-m.4.hor   AT3G56330   N2,N2-dimethylguanosine tRNA methyltransferase 
 ath-m.4.lig   AT3G56330   N2,N2-dimethylguanosine tRNA methyltransferase 
 ath-m.4.str   AT3G56330   N2,N2-dimethylguanosine tRNA methyltransferase 
 ath-m.4.tis   AT3G56330   N2,N2-dimethylguanosine tRNA methyltransferase 
 bra-r.6   103841541   probable tRNA (guanine(26)-N(2))-dimethyltransferase 
 bna-r.1   106367969   tRNA (guanine(26)-N(2))-dimethyltransferase 
 bna-r.1   106368087   tRNA (guanine(26)-N(2))-dimethyltransferase 
 ghi-r.1   107904453   tRNA (guanine(26)-N(2))-dimethyltransferase 
 ghi-r.1   107904851   tRNA (guanine(26)-N(2))-dimethyltransferase 
 cit-r.1   102619918   tRNA (guanine(26)-N(2))-dimethyltransferase 
 gma-u.5   100788340   tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase 
 vvi-u.5   100243386   N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1-like 
 ppo-u.5   7479026   tRNA (guanine(26)-N(2))-dimethyltransferase 
 mtr-u.5   25489844   tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase 
 sly-u.5   101256679   tRNA (guanine(26)-N(2))-dimethyltransferase 
 sot-r.1   102584325   tRNA (guanine(26)-N(2))-dimethyltransferase 
 nta-r.1   107830261   tRNA (guanine(26)-N(2))-dimethyltransferase 
 nta-r.1   107829593   tRNA (guanine(26)-N(2))-dimethyltransferase 
 osa-u.5   4338419   uncharacterized LOC4338419 
 zma-u.5   100276957   uncharacterized LOC100276957 
 tae-r.2   123080600   tRNA (guanine(26)-N(2))-dimethyltransferase 
 hvu-r.1   123445419   tRNA (guanine(26)-N(2))-dimethyltransferase-like 
 sbi-r.1   8066754   tRNA (guanine(26)-N(2))-dimethyltransferase 
 bdi-r.1   100833677   tRNA (guanine(26)-N(2))-dimethyltransferase 
 cre-r.1   CHLRE_10g428100v5   uncharacterized protein 

close


Top 50 coexpressed genes to AT3G56330 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT3G56330 (ath-m.9 coexpression data)

CoexMap"824800"


athAT3G56330 | Entrez gene ID : 824800      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006400 [list] [network] tRNA modification  (41 genes)  ISS  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO MF
GO:0160102 [list] [network] tRNA (guanine(10)-N2)-methyltransferase activity  (3 genes)  IEA  
GO:0160104 [list] [network] tRNA (guanine(26)-N2)-dimethyltransferase activity  (3 genes)  IEA  
Protein NP_191192.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for NP_191192.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_191192.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G56330
ath-u.5
for
AT3G56330
ath-r.7
for
AT3G56330
ath-e.2
for
AT3G56330
ath-m.4.bio
for
AT3G56330
ath-m.4.hor
for
AT3G56330
ath-m.4.lig
for
AT3G56330
ath-m.4.str
for
AT3G56330
ath-m.4.tis
for
AT3G56330
bra-r.6
for
103841541
bna-r.1
for
106367969
bna-r.1
for
106368087
ghi-r.1
for
107904453
ghi-r.1
for
107904851
cit-r.1
for
102619918
gma-u.5
for
100788340
vvi-u.5
for
100243386
ppo-u.5
for
7479026
mtr-u.5
for
25489844
sly-u.5
for
101256679
sot-r.1
for
102584325
nta-r.1
for
107830261
nta-r.1
for
107829593
osa-u.5
for
4338419
zma-u.5
for
100276957
tae-r.2
for
123080600
hvu-r.1
for
123445419
sbi-r.1
for
8066754
bdi-r.1
for
100833677
cre-r.1
for
CHLRE_10g428100v5


Ortholog ID: 10827
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae hvu sbi bdi cre
Symbol AT3G56330 LOC103841541 LOC106367969 LOC106368087 LOC107904453 LOC107904851 LOC102619918 LOC100788340 LOC100243386 LOC7479026 LOC25489844 LOC101256679 LOC102584325 LOC107830261 LOC107829593 LOC4338419 LOC100276957 LOC123080600 LOC123445419 LOC8066754 LOC100833677 CHLRE_10g428100v5
Function* N2,N2-dimethylguanosine tRNA methyltransferase probable tRNA (guanine(26)-N(2))-dimethyltransferase tRNA (guanine(26)-N(2))-dimethyltransferase tRNA (guanine(26)-N(2))-dimethyltransferase tRNA (guanine(26)-N(2))-dimethyltransferase tRNA (guanine(26)-N(2))-dimethyltransferase tRNA (guanine(26)-N(2))-dimethyltransferase tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1-like tRNA (guanine(26)-N(2))-dimethyltransferase tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase tRNA (guanine(26)-N(2))-dimethyltransferase tRNA (guanine(26)-N(2))-dimethyltransferase tRNA (guanine(26)-N(2))-dimethyltransferase tRNA (guanine(26)-N(2))-dimethyltransferase uncharacterized LOC4338419 uncharacterized LOC100276957 tRNA (guanine(26)-N(2))-dimethyltransferase tRNA (guanine(26)-N(2))-dimethyltransferase-like tRNA (guanine(26)-N(2))-dimethyltransferase tRNA (guanine(26)-N(2))-dimethyltransferase uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 3
ghi01240 Biosynthesis of cofactors 3
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00052 Galactose metabolism 2
mtr00561 Glycerolipid metabolism 2
mtr00600 Sphingolipid metabolism 2
mtr00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03018 RNA degradation 3
sot01230 Biosynthesis of amino acids 3
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00750 Vitamin B6 metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 3
nta00260 Glycine, serine and threonine metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
bdi00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824800 103841541 106367969 106368087 107904453 107904851 102619918 100788340 100243386 7479026 25489844 101256679 102584325 107830261 107829593 4338419 100276957 123080600 123445419 8066754 100833677 5728147
The preparation time of this page was 0.1 [sec].