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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   SIB1   sigma factor binding protein 1 
 ath-u.5   SIB1   sigma factor binding protein 1 
 ath-r.7   SIB1   sigma factor binding protein 1 
 ath-e.2   SIB1   sigma factor binding protein 1 
 ath-m.4.bio   SIB1   sigma factor binding protein 1 
 ath-m.4.hor   SIB1   sigma factor binding protein 1 
 ath-m.4.lig   SIB1   sigma factor binding protein 1 
 ath-m.4.str   SIB1   sigma factor binding protein 1 
 ath-m.4.tis   SIB1   sigma factor binding protein 1 
 bra-r.6   103830065   sigma factor binding protein 1, chloroplastic 
 bra-r.6   103841570   sigma factor binding protein 1, chloroplastic 
 bra-r.6   103857968   sigma factor binding protein 2, chloroplastic 
 bna-r.1   111215323   sigma factor binding protein 1, chloroplastic-like 
 bna-r.1   106368000   sigma factor binding protein 1, chloroplastic-like 
 ghi-r.1   107927566   sigma factor binding protein 1, chloroplastic 
 ghi-r.1   107925727   uncharacterized LOC107925727 
 ghi-r.1   107915563   sigma factor binding protein 1, chloroplastic 
 gma-u.5   102665525   uncharacterized LOC102665525 
 gma-u.5   102661022   sigma factor binding protein 1, chloroplastic 
 gma-u.5   100808231   uncharacterized LOC100808231 
 vvi-u.5   100243497   sigma factor binding protein 2, chloroplastic 
 ppo-u.5   7464100   sigma factor binding protein 1, chloroplastic 
 mtr-u.5   11413308   sigma factor binding protein 2, chloroplastic 
 mtr-u.5   11420359   uncharacterized LOC11420359 
 mtr-u.5   11444007   sigma factor binding protein 1, chloroplastic 
 sly-u.5   101268143   sigma factor binding protein 1, chloroplastic 
 sot-r.1   102588850   uncharacterized LOC102588850 
 sot-r.1   107060694   sigma factor binding protein 2, chloroplastic-like 
 nta-r.1   107793698   uncharacterized LOC107793698 
 osa-u.5   4327561   uncharacterized LOC4327561 
 osa-u.5   4332662   uncharacterized LOC4332662 
 osa-u.5   9272551   VQ motif-containing protein 10 
 zma-u.5   100283012   VQ motif family protein 
 zma-u.5   100283880   uncharacterized LOC100283880 
 zma-u.5   100284142   uncharacterized LOC100284142 
 tae-r.2   123071128   uncharacterized LOC123071128 
 hvu-r.1   123440394   sigma factor binding protein 1, chloroplastic-like 
 sbi-r.1   8059833   uncharacterized LOC8059833 
 sbi-r.1   8055268   uncharacterized LOC8055268 
 bdi-r.1   106865623   uncharacterized LOC106865623 

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Top 50 coexpressed genes to SIB1 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SIB1 (ath-m.9 coexpression data)

CoexMap"824838"


athSIB1 | Entrez gene ID : 824838      
Species ath bra bna ghi gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cit cre
Paralog 9 3 2 3 3 1 1 3 1 2 1 3 3 1 1 2 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051091 [list] [network] positive regulation of DNA-binding transcription factor activity  (4 genes)  IDA  
GO:0071482 [list] [network] cellular response to light stimulus  (105 genes)  IEP  
GO:0042742 [list] [network] defense response to bacterium  (363 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001325423.1 [sequence] [blastp]
NP_191230.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001325423.1)
nucl 10  (predict for NP_191230.1)
Subcellular
localization
TargetP
chlo 9,  other 4  (predict for NP_001325423.1)
chlo 9,  other 4  (predict for NP_191230.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
SIB1
ath-u.5
for
SIB1
ath-r.7
for
SIB1
ath-e.2
for
SIB1
ath-m.4.bio
for
SIB1
ath-m.4.hor
for
SIB1
ath-m.4.lig
for
SIB1
ath-m.4.str
for
SIB1
ath-m.4.tis
for
SIB1
bra-r.6
for
103830065
bra-r.6
for
103841570
bra-r.6
for
103857968
bna-r.1
for
111215323
bna-r.1
for
106368000
ghi-r.1
for
107927566
ghi-r.1
for
107925727
ghi-r.1
for
107915563
gma-u.5
for
102665525
gma-u.5
for
102661022
gma-u.5
for
100808231
vvi-u.5
for
100243497
ppo-u.5
for
7464100
mtr-u.5
for
11413308
mtr-u.5
for
11420359
mtr-u.5
for
11444007
sly-u.5
for
101268143
sot-r.1
for
102588850
sot-r.1
for
107060694
nta-r.1
for
107793698
osa-u.5
for
4327561
osa-u.5
for
4332662
osa-u.5
for
9272551
zma-u.5
for
100283012
zma-u.5
for
100283880
zma-u.5
for
100284142
tae-r.2
for
123071128
hvu-r.1
for
123440394
sbi-r.1
for
8059833
sbi-r.1
for
8055268
bdi-r.1
for
106865623


Ortholog ID: 2544
Species ath bra bra bra bna bna ghi ghi ghi gma gma gma vvi ppo mtr mtr mtr sly sot sot nta osa osa zma zma zma tae tae hvu sbi sbi bdi
Symbol SIB1 LOC103841570 LOC103857968 LOC103863088 LOC106368000 LOC106394434 LOC107927566 LOC107915563 LOC121207605 LOC102665525 LOC100808231 LOC100306482 LOC100243497 LOC7464100 LOC11413308 LOC11420359 LOC11444007 LOC101268143 LOC102588850 LOC107060694 LOC107793698 LOC4327561 LOC4332662 LOC100283012 LOC100283880 LOC100284142 LOC123062355 LOC123094868 LOC123440394 LOC8059833 LOC8055268 LOC106865623
Function* sigma factor binding protein 1 sigma factor binding protein 1, chloroplastic sigma factor binding protein 2, chloroplastic sigma factor binding protein 1, chloroplastic sigma factor binding protein 1, chloroplastic-like sigma factor binding protein 2, chloroplastic-like sigma factor binding protein 1, chloroplastic sigma factor binding protein 1, chloroplastic sigma factor binding protein 1, chloroplastic uncharacterized LOC102665525 uncharacterized LOC100808231 uncharacterized LOC100306482 sigma factor binding protein 2, chloroplastic sigma factor binding protein 1, chloroplastic sigma factor binding protein 2, chloroplastic uncharacterized LOC11420359 sigma factor binding protein 1, chloroplastic sigma factor binding protein 1, chloroplastic uncharacterized LOC102588850 sigma factor binding protein 2, chloroplastic-like uncharacterized LOC107793698 uncharacterized LOC4327561 uncharacterized LOC4332662 VQ motif family protein uncharacterized LOC100283880 uncharacterized LOC100284142 sigma factor binding protein 1, chloroplastic uncharacterized LOC123094868 sigma factor binding protein 1, chloroplastic-like uncharacterized LOC8059833 uncharacterized LOC8055268 uncharacterized LOC106865623
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
bna04626 Plant-pathogen interaction 2
bna00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
gma04016 MAPK signaling pathway - plant 2
gma04070 Phosphatidylinositol signaling system 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 3
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 4
mtr04075 Plant hormone signal transduction 2
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 5
sly04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00999 Biosynthesis of various plant secondary metabolites 2
osa00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
osa04016 MAPK signaling pathway - plant 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 2
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
sbi00561 Glycerolipid metabolism 2
sbi00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824838 103841570 103857968 103863088 106368000 106394434 107927566 107915563 121207605 102665525 100808231 100306482 100243497 7464100 11413308 11420359 11444007 101268143 102588850 107060694 107793698 4327561 4332662 100283012 100283880 100284142 123062355 123094868 123440394 8059833 8055268 106865623
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