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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G58660   Ribosomal protein L1p/L10e family 
 ath-u.5   AT3G58660   Ribosomal protein L1p/L10e family 
 ath-r.7   AT3G58660   Ribosomal protein L1p/L10e family 
 ath-e.2   AT3G58660   Ribosomal protein L1p/L10e family 
 ath-m.4.bio   AT3G58660   Ribosomal protein L1p/L10e family 
 ath-m.4.hor   AT3G58660   Ribosomal protein L1p/L10e family 
 ath-m.4.lig   AT3G58660   Ribosomal protein L1p/L10e family 
 ath-m.4.str   AT3G58660   Ribosomal protein L1p/L10e family 
 ath-m.4.tis   AT3G58660   Ribosomal protein L1p/L10e family 
 ath-u.5   AT2G42650   Ribosomal protein L1p/L10e family 
 ath-u.5   AT1G06380   Ribosomal protein L1p/L10e family 
 bra-r.6   103841740   ribosomal L1 domain-containing protein 1 
 bra-r.6   103830178   putative ribosome biogenesis protein C8F11.04 
 bra-r.6   103843557   ribosomal L1 domain-containing protein 1 
 bna-r.1   106451399   ribosomal L1 domain-containing protein 1 
 bna-r.1   106368287   ribosomal L1 domain-containing protein 1 
 bna-r.1   106353178   putative ribosome biogenesis protein C8F11.04 
 ghi-r.1   107888490   ribosomal L1 domain-containing protein 1 
 ghi-r.1   107931348   ribosomal L1 domain-containing protein 1 
 cit-r.1   102624801   uncharacterized LOC102624801 
 gma-u.5   100782862   ribosomal L1 domain-containing protein 1 
 gma-u.5   100815650   ribosomal L1 domain-containing protein 1 
 vvi-u.5   100264299   uncharacterized LOC100264299 
 ppo-u.5   7484918   uncharacterized LOC7484918 
 ppo-u.5   7474067   uncharacterized LOC7474067 
 mtr-u.5   11418643   ribosomal L1 domain-containing protein 1 
 sly-u.5   101263646   uncharacterized LOC101263646 
 sly-u.5   101253372   uncharacterized LOC101253372 
 sot-r.1   102595050   ribosomal L1 domain-containing protein 1 
 sot-r.1   107063314   ribosomal L1 domain-containing protein 1-like 
 nta-r.1   107765074   uncharacterized LOC107765074 
 nta-r.1   107774981   uncharacterized LOC107774981 
 nta-r.1   107786707   putative ribosome biogenesis protein C8F11.04 
 osa-u.5   4339582   uncharacterized LOC4339582 
 zma-u.5   100279960   uncharacterized LOC100279960 
 zma-u.5   100191559   uncharacterized LOC100191559 
 tae-r.2   123067680   ribosomal L1 domain-containing protein 1 
 tae-r.2   123071627   ribosomal L1 domain-containing protein 1 
 hvu-r.1   123449905   ribosomal L1 domain-containing protein 1-like 
 sbi-r.1   110430218   ribosomal L1 domain-containing protein 1-like 
 bdi-r.1   100828988   ribosomal L1 domain-containing protein 1 
 cre-r.1   CHLRE_07g314100v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G58660 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G58660 (ath-m.9 coexpression data)

CoexMap"825035"


athAT3G58660 | Entrez gene ID : 825035      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 11 3 3 2 1 2 1 2 1 2 2 3 1 2 2 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005730 [list] [network] nucleolus  (394 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_191425.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 4,  nucl 1  (predict for NP_191425.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_191425.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G58660
ath-u.5
for
AT3G58660
ath-r.7
for
AT3G58660
ath-e.2
for
AT3G58660
ath-m.4.bio
for
AT3G58660
ath-m.4.hor
for
AT3G58660
ath-m.4.lig
for
AT3G58660
ath-m.4.str
for
AT3G58660
ath-m.4.tis
for
AT3G58660
ath-u.5
for
AT2G42650
ath-u.5
for
AT1G06380
bra-r.6
for
103841740
bra-r.6
for
103830178
bra-r.6
for
103843557
bna-r.1
for
106451399
bna-r.1
for
106368287
bna-r.1
for
106353178
ghi-r.1
for
107888490
ghi-r.1
for
107931348
cit-r.1
for
102624801
gma-u.5
for
100782862
gma-u.5
for
100815650
vvi-u.5
for
100264299
ppo-u.5
for
7484918
ppo-u.5
for
7474067
mtr-u.5
for
11418643
sly-u.5
for
101263646
sly-u.5
for
101253372
sot-r.1
for
102595050
sot-r.1
for
107063314
nta-r.1
for
107765074
nta-r.1
for
107774981
nta-r.1
for
107786707
osa-u.5
for
4339582
zma-u.5
for
100279960
zma-u.5
for
100191559
tae-r.2
for
123067680
tae-r.2
for
123071627
hvu-r.1
for
123449905
sbi-r.1
for
110430218
bdi-r.1
for
100828988
cre-r.1
for
CHLRE_07g314100v5


Ortholog ID: 4058
Species ath ath ath bra bra bra bna bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sly sot sot nta nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol AT3G58660 AT2G42650 AT1G06380 LOC103841740 LOC103830178 LOC103862969 LOC106368287 LOC106353178 LOC106390365 LOC107888490 LOC107931348 LOC102624801 LOC100782862 LOC100815650 LOC100264299 LOC7484918 LOC7474067 LOC11418643 LOC101263646 LOC101253372 LOC102595050 LOC107063314 LOC107765074 LOC107774981 LOC107793874 LOC4339582 LOC100279960 LOC100191559 LOC123067680 LOC123145300 LOC123449905 LOC110430218 LOC100828988 CHLRE_07g314100v5
Function* Ribosomal protein L1p/L10e family Ribosomal protein L1p/L10e family Ribosomal protein L1p/L10e family ribosomal L1 domain-containing protein 1 putative ribosome biogenesis protein C8F11.04 ribosomal L1 domain-containing protein 1 ribosomal L1 domain-containing protein 1 putative ribosome biogenesis protein C8F11.04 ribosomal L1 domain-containing protein 1 ribosomal L1 domain-containing protein 1 ribosomal L1 domain-containing protein 1 uncharacterized LOC102624801 ribosomal L1 domain-containing protein 1 ribosomal L1 domain-containing protein 1 uncharacterized LOC100264299 uncharacterized LOC7484918 uncharacterized LOC7474067 ribosomal L1 domain-containing protein 1 uncharacterized LOC101263646 uncharacterized LOC101253372 ribosomal L1 domain-containing protein 1 ribosomal L1 domain-containing protein 1-like uncharacterized LOC107765074 uncharacterized LOC107774981 uncharacterized LOC107793874 uncharacterized LOC4339582 uncharacterized LOC100279960 uncharacterized LOC100191559 ribosomal L1 domain-containing protein 1 ribosomal L1 domain-containing protein 1 ribosomal L1 domain-containing protein 1-like ribosomal L1 domain-containing protein 1-like ribosomal L1 domain-containing protein 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
gma00230 Purine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly03010 Ribosome 3
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta00230 Purine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825035 818865 837149 103841740 103830178 103862969 106368287 106353178 106390365 107888490 107931348 102624801 100782862 100815650 100264299 7484918 7474067 11418643 101263646 101253372 102595050 107063314 107765074 107774981 107793874 4339582 100279960 100191559 123067680 123145300 123449905 110430218 100828988 5726518
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