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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   PIL2   phytochrome interacting factor 3-like 2 
 ath-m.4.bio   PIL2   phytochrome interacting factor 3-like 2 
 ath-m.4.hor   PIL2   phytochrome interacting factor 3-like 2 
 ath-m.4.lig   PIL2   phytochrome interacting factor 3-like 2 
 ath-m.4.str   PIL2   phytochrome interacting factor 3-like 2 
 ath-m.4.tis   PIL2   phytochrome interacting factor 3-like 2 
 bra-r.6   103842035   transcription factor PIF6 
 bna-r.1   106416114   transcription factor PIF6 

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Top 50 coexpressed genes to PIL2 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PIL2 (ath-m.9 coexpression data)

CoexMap"825382"


athPIL2 | Entrez gene ID : 825382      
Species ath bra bna hvu sbi sly zma cre ppo nta osa mtr cit gma ghi tae vvi bdi sot
Paralog 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04075 [list] [network] Plant hormone signal transduction (433 genes)
GO BP
GO:1902074 [list] [network] response to salt  (50 genes)  IEP  
GO:0010017 [list] [network] red or far-red light signaling pathway  (53 genes)  IEP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IEP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (446 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  IEA ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001078329.1 [sequence] [blastp]
NP_001190160.1 [sequence] [blastp]
NP_001327149.1 [sequence] [blastp]
NP_191768.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001078329.1)
nucl 9  (predict for NP_001190160.1)
nucl 10  (predict for NP_001327149.1)
nucl 8,  plas 1,  pero 1,  cysk 1,  cysk_plas 1  (predict for NP_191768.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001078329.1)
other 6,  mito 3  (predict for NP_001190160.1)
other 7  (predict for NP_001327149.1)
other 6,  mito 3  (predict for NP_191768.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
PIL2
ath-m.4.bio
for
PIL2
ath-m.4.hor
for
PIL2
ath-m.4.lig
for
PIL2
ath-m.4.str
for
PIL2
ath-m.4.tis
for
PIL2
bra-r.6
for
103842035
bna-r.1
for
106416114


Ortholog ID: 22741
Species bra bna
Symbol LOC103842035 LOC106416114
Function* transcription factor PIF6 transcription factor PIF6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03272 Virion - Hepatitis viruses 2
bna04144 Endocytosis 2
bna04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern
Entrez Gene ID* 103842035 106416114
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