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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G62500   F-box protein RMF 
 ath-u.5   AT3G62500   F-box protein RMF 
 ath-r.7   AT3G62500   F-box protein RMF 
 ath-e.2   AT3G62500   F-box protein RMF 
 ath-m.4.bio   AT3G62500   F-box protein RMF 
 ath-m.4.hor   AT3G62500   F-box protein RMF 
 ath-m.4.lig   AT3G62500   F-box protein RMF 
 ath-m.4.str   AT3G62500   F-box protein RMF 
 ath-m.4.tis   AT3G62500   F-box protein RMF 
 bna-r.1   106353290   probable F-box protein At3g61730 
 bna-r.1   106353291   probable F-box protein At3g61730 
 vvi-u.5   104881962   probable F-box protein At3g61730 
 osa-u.5   4324638   probable F-box protein At3g61730 
 tae-r.2   123060699   probable F-box protein At3g61730 
 bdi-r.1   100829279   probable F-box protein At3g61730 

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Top 50 coexpressed genes to AT3G62500 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G62500 (ath-m.9 coexpression data)

CoexMap"825424"


athAT3G62500 | Entrez gene ID : 825424      
Species ath bna vvi osa tae bdi sbi ghi cre ppo bra mtr sly zma cit sot gma nta hvu
Paralog 9 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_001326690.1 [sequence] [blastp]
NP_191809.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  plas 1,  mito 1,  golg_plas 1,  chlo 1,  cysk 1,  cyto_mito 1  (predict for NP_001326690.1)
nucl 6,  mito 1,  plas 1,  golg_plas 1  (predict for NP_191809.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001326690.1)
other 8  (predict for NP_191809.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G62500
ath-u.5
for
AT3G62500
ath-r.7
for
AT3G62500
ath-e.2
for
AT3G62500
ath-m.4.bio
for
AT3G62500
ath-m.4.hor
for
AT3G62500
ath-m.4.lig
for
AT3G62500
ath-m.4.str
for
AT3G62500
ath-m.4.tis
for
AT3G62500
bna-r.1
for
106353290
bna-r.1
for
106353291
vvi-u.5
for
104881962
osa-u.5
for
4324638
tae-r.2
for
123060699
bdi-r.1
for
100829279


Ortholog ID: 5337
Species ath bna bna bna vvi osa tae bdi
Symbol AT3G62500 LOC106353290 LOC106353291 LOC106433930 LOC104881962 LOC4324638 LOC123060699 LOC100829279
Function* F-box protein RMF probable F-box protein At3g61730 probable F-box protein At3g61730 probable F-box protein At3g61730 probable F-box protein At3g61730 probable F-box protein At3g61730 probable F-box protein At3g61730 probable F-box protein At3g61730
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 2
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00330 Arginine and proline metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825424 106353290 106353291 106433930 104881962 4324638 123060699 100829279
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