ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	AT4G11800	Calcineurin-like metallo-phosphoesterase superfamily protein
ath-u.5	AT4G11800	Calcineurin-like metallo-phosphoesterase superfamily protein
ath-r.7	AT4G11800	Calcineurin-like metallo-phosphoesterase superfamily protein
ath-e.2	AT4G11800	Calcineurin-like metallo-phosphoesterase superfamily protein
ath-m.4.bio	AT4G11800	Calcineurin-like metallo-phosphoesterase superfamily protein
ath-m.4.hor	AT4G11800	Calcineurin-like metallo-phosphoesterase superfamily protein
ath-m.4.lig	AT4G11800	Calcineurin-like metallo-phosphoesterase superfamily protein
ath-m.4.str	AT4G11800	Calcineurin-like metallo-phosphoesterase superfamily protein
ath-m.4.tis	AT4G11800	Calcineurin-like metallo-phosphoesterase superfamily protein
ath-u.5	AT4G23000	Calcineurin-like metallo-phosphoesterase superfamily protein
bra-r.6	103853501	uncharacterized LOC103853501
bra-r.6	103828821	uncharacterized LOC103828821
bra-r.6	103861350	uncharacterized LOC103861350
bna-r.1	106434391	uncharacterized LOC106434391
bna-r.1	106351446	uncharacterized LOC106351446
bna-r.1	111207881	uncharacterized LOC111207881
ghi-r.1	107940690	uncharacterized LOC107940690
ghi-r.1	107958099	uncharacterized LOC107958099
ghi-r.1	107940326	uncharacterized LOC107940326
cit-r.1	102621653	uncharacterized LOC102621653
gma-u.5	100819940	uncharacterized LOC100819940
gma-u.5	100820584	uncharacterized LOC100820584
vvi-u.5	100267859	uncharacterized LOC100267859
ppo-u.5	18104935	uncharacterized LOC18104935
mtr-u.5	25482073	uncharacterized LOC25482073
sly-u.5	101266203	uncharacterized LOC101266203
sly-u.5	101261408	uncharacterized LOC101261408
sot-r.1	102601564	uncharacterized LOC102601564
sot-r.1	102581113	uncharacterized LOC102581113
nta-r.1	107766649	uncharacterized LOC107766649
nta-r.1	107790962	uncharacterized LOC107790962
nta-r.1	107811114	uncharacterized LOC107811114
osa-u.5	4342347	uncharacterized LOC4342347
osa-u.5	4342196	uncharacterized LOC4342196
zma-u.5	103647275	Calcineurin-like metallo-phosphoesterase superfamily protein
zma-u.5	103631870	Calcineurin-like metallo-phosphoesterase superfamily protein
tae-r.2	123052970	uncharacterized LOC123052970
tae-r.2	123188832	uncharacterized LOC123188832
tae-r.2	123113132	uncharacterized LOC123113132
hvu-r.1	123426371	uncharacterized LOC123426371
hvu-r.1	123452036	uncharacterized LOC123452036
sbi-r.1	8054502	uncharacterized LOC8054502
sbi-r.1	8059777	uncharacterized LOC8059777
bdi-r.1	100823404	uncharacterized LOC100823404
bdi-r.1	100842069	uncharacterized LOC100842069
cre-r.1	CHLRE_03g150800v5	uncharacterized protein

Top 50 coexpressed genes to AT4G11800 (ath-m.9 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT4G11800 (ath-m.9 coexpression data)

CoexMap"826786"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005783 [list] [network] endoplasmic reticulum	(897 genes)	HDA
GO:0005739 [list] [network] mitochondrion	(4244 genes)	ISM

GO MF

GO:0016787 [list] [network] hydrolase activity

(1660 genes)

IEA

Protein

NP_192917.3 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, E.R. 2, chlo 1, pero 1

(predict for NP_192917.3)

Subcellular
localization
TargetP

other 9, mito 3

(predict for NP_192917.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AT4G11800	ath-u.5 for AT4G11800	ath-r.7 for AT4G11800	ath-e.2 for AT4G11800	ath-m.4.bio for AT4G11800	ath-m.4.hor for AT4G11800	ath-m.4.lig for AT4G11800	ath-m.4.str for AT4G11800	ath-m.4.tis for AT4G11800	ath-u.5 for AT4G23000	bra-r.6 for 103853501	bra-r.6 for 103828821	bra-r.6 for 103861350	bna-r.1 for 106434391	bna-r.1 for 106351446	bna-r.1 for 111207881	ghi-r.1 for 107940690	ghi-r.1 for 107958099	ghi-r.1 for 107940326	cit-r.1 for 102621653	gma-u.5 for 100819940	gma-u.5 for 100820584	vvi-u.5 for 100267859	ppo-u.5 for 18104935	mtr-u.5 for 25482073	sly-u.5 for 101266203	sly-u.5 for 101261408	sot-r.1 for 102601564	sot-r.1 for 102581113	nta-r.1 for 107766649	nta-r.1 for 107790962	nta-r.1 for 107811114	osa-u.5 for 4342347	osa-u.5 for 4342196	zma-u.5 for 103647275	zma-u.5 for 103631870	tae-r.2 for 123052970	tae-r.2 for 123188832	tae-r.2 for 123113132	hvu-r.1 for 123426371	hvu-r.1 for 123452036	sbi-r.1 for 8054502	sbi-r.1 for 8059777	bdi-r.1 for 100823404	bdi-r.1 for 100842069	cre-r.1 for CHLRE_03g150800v5

Ortholog

Ortholog ID: 3822

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

Calcineurin-like metallo-phosphoesterase superfamily protein

uncharacterized LOC103853501

uncharacterized LOC103828821

uncharacterized LOC103861350

uncharacterized LOC106367013

uncharacterized LOC106393376

uncharacterized BNAC07G37770D

uncharacterized LOC107940690

uncharacterized LOC107958099

uncharacterized LOC107935604

uncharacterized LOC102621653

uncharacterized LOC100819940

uncharacterized LOC100820584

uncharacterized LOC100267859

uncharacterized LOC18104935

uncharacterized LOC25482073

uncharacterized LOC101266203

uncharacterized LOC101261408

uncharacterized LOC102601564

uncharacterized LOC102581113

uncharacterized LOC107790962

uncharacterized LOC107811114

uncharacterized LOC107830573

uncharacterized LOC4342347

uncharacterized LOC4342196

Calcineurin-like metallo-phosphoesterase superfamily protein

uncharacterized LOC123188832

uncharacterized LOC123104851

uncharacterized LOC123045145

uncharacterized LOC123426371

uncharacterized LOC123452036

uncharacterized LOC8054502

uncharacterized LOC8059777

uncharacterized LOC100823404

uncharacterized LOC100842069

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00561	Glycerolipid metabolism	4
ath00566	Sulfoquinovose metabolism	2
ath00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03022	Basal transcription factors	2
ghi04146	Peroxisome	2
ghi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04146	Peroxisome	3
cit00592	alpha-Linolenic acid metabolism	3
cit00071	Fatty acid degradation	2
cit01040	Biosynthesis of unsaturated fatty acids	2
cit01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00561	Glycerolipid metabolism	3
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	3
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	2
sly00860	Porphyrin metabolism	2
sly01240	Biosynthesis of cofactors	2
sly03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	2
sot00564	Glycerophospholipid metabolism	2
sot00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2
nta00511	Other glycan degradation	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04148	Efferocytosis	3
nta00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04081	Hormone signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00564	Glycerophospholipid metabolism	5
osa00440	Phosphonate and phosphinate metabolism	2
osa00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2
zma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00561	Glycerolipid metabolism	3
zma00564	Glycerophospholipid metabolism	3
zma00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00564	Glycerophospholipid metabolism	2
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00564	Glycerophospholipid metabolism	3
sbi00740	Riboflavin metabolism	2
sbi00561	Glycerolipid metabolism	2
sbi00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01240	Biosynthesis of cofactors	4
sbi00051	Fructose and mannose metabolism	3
sbi00520	Amino sugar and nucleotide sugar metabolism	2
sbi01250	Biosynthesis of nucleotide sugars	2
sbi00760	Nicotinate and nicotinamide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	2

Expression

Expression pattern

Entrez Gene ID^*

826786

828399

103853501

103828821

103861350

106367013

106393376

106440465

107940690

107958099

107935604

102621653

100819940

100820584

100267859

18104935

25482073

101266203

101261408

102601564

102581113

107790962

107811114

107830573

4342347

4342196

103647275

103631870

123188832

123104851

123045145

123426371

123452036

8054502

8059777

100823404

100842069

5721145

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Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	10	3	3	3	1	2	1	1	1	2	2	3	2	2	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT4G11800 (ath-m.9 coexpression data)

Top 50 enrichment test to AT4G11800 (ath-m.9 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**