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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   PTAC5   plastid transcriptionally active 5 
 ath-u.5   PTAC5   plastid transcriptionally active 5 
 ath-r.7   PTAC5   plastid transcriptionally active 5 
 ath-e.2   PTAC5   plastid transcriptionally active 5 
 ath-m.4.bio   PTAC5   plastid transcriptionally active 5 
 ath-m.4.hor   PTAC5   plastid transcriptionally active 5 
 ath-m.4.lig   PTAC5   plastid transcriptionally active 5 
 ath-m.4.str   PTAC5   plastid transcriptionally active 5 
 ath-m.4.tis   PTAC5   plastid transcriptionally active 5 
 bra-r.6   103863611   protein disulfide isomerase pTAC5, chloroplastic 
 bna-r.1   106388403   protein disulfide isomerase pTAC5, chloroplastic-like 
 bna-r.1   106426998   protein disulfide isomerase pTAC5, chloroplastic 
 ghi-r.1   107897755   protein disulfide isomerase pTAC5, chloroplastic 
 ghi-r.1   107914841   protein disulfide isomerase pTAC5, chloroplastic 
 cit-r.1   102613832   protein disulfide isomerase pTAC5, chloroplastic 
 gma-u.5   100810184   protein disulfide isomerase pTAC5, chloroplastic 
 gma-u.5   100808436   protein disulfide isomerase pTAC5, chloroplastic 
 vvi-u.5   100259626   protein disulfide isomerase pTAC5, chloroplastic 
 ppo-u.5   7496064   protein disulfide isomerase pTAC5, chloroplastic 
 mtr-u.5   11431277   protein disulfide isomerase pTAC5, chloroplastic 
 sly-u.5   101263249   protein disulfide isomerase pTAC5, chloroplastic 
 sot-r.1   102588743   uncharacterized LOC102588743 
 nta-r.1   107777139   protein disulfide isomerase pTAC5, chloroplastic 
 osa-u.5   4336393   protein disulfide isomerase pTAC5, chloroplastic 
 zma-u.5   100281154   peptidoglycan binding domain containing protein 
 tae-r.2   123054010   protein disulfide isomerase pTAC5, chloroplastic 
 tae-r.2   123046128   protein disulfide isomerase pTAC5, chloroplastic 
 tae-r.2   123189897   protein disulfide isomerase pTAC5, chloroplastic 
 hvu-r.1   123427235   protein disulfide isomerase pTAC5, chloroplastic 
 sbi-r.1   8064489   uncharacterized LOC8064489 
 bdi-r.1   100839360   protein disulfide isomerase pTAC5, chloroplastic 
 cre-r.1   CHLRE_19g750397v5   uncharacterized protein 

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Top 50 coexpressed genes to PTAC5 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PTAC5 (ath-m.9 coexpression data)

CoexMap"827001"


athPTAC5 | Entrez gene ID : 827001      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 1 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042793 [list] [network] plastid transcription  (15 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (197 genes)  IMP  
GO:0009408 [list] [network] response to heat  (271 genes)  IMP  
GO:0009416 [list] [network] response to light stimulus  (776 genes)  IDA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IMP  
GO CC
GO:0000427 [list] [network] plastid-encoded plastid RNA polymerase complex  (12 genes)  IDA  
GO:0042644 [list] [network] chloroplast nucleoid  (48 genes)  HDA IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (417 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
GO:0003756 [list] [network] protein disulfide isomerase activity  (18 genes)  IDA IEA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001328389.1 [sequence] [blastp]
NP_001328390.1 [sequence] [blastp]
NP_001328391.1 [sequence] [blastp]
NP_193103.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1,  extr 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001328389.1)
chlo 7,  nucl 1,  mito 1,  extr 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001328390.1)
chlo 8,  nucl 1,  mito 1,  plas 1,  nucl_plas 1,  mito_plas 1  (predict for NP_001328391.1)
chlo 8,  nucl 1  (predict for NP_193103.2)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001328389.1)
chlo 9  (predict for NP_001328390.1)
chlo 9  (predict for NP_001328391.1)
chlo 9  (predict for NP_193103.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
PTAC5
ath-u.5
for
PTAC5
ath-r.7
for
PTAC5
ath-e.2
for
PTAC5
ath-m.4.bio
for
PTAC5
ath-m.4.hor
for
PTAC5
ath-m.4.lig
for
PTAC5
ath-m.4.str
for
PTAC5
ath-m.4.tis
for
PTAC5
bra-r.6
for
103863611
bna-r.1
for
106388403
bna-r.1
for
106426998
ghi-r.1
for
107897755
ghi-r.1
for
107914841
cit-r.1
for
102613832
gma-u.5
for
100810184
gma-u.5
for
100808436
vvi-u.5
for
100259626
ppo-u.5
for
7496064
mtr-u.5
for
11431277
sly-u.5
for
101263249
sot-r.1
for
102588743
nta-r.1
for
107777139
osa-u.5
for
4336393
zma-u.5
for
100281154
tae-r.2
for
123054010
tae-r.2
for
123046128
tae-r.2
for
123189897
hvu-r.1
for
123427235
sbi-r.1
for
8064489
bdi-r.1
for
100839360
cre-r.1
for
CHLRE_19g750397v5


Ortholog ID: 10852
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta osa zma tae tae tae hvu sbi bdi cre
Symbol PTAC5 LOC103863611 LOC106388403 LOC106426998 LOC107897755 LOC107914841 LOC102613832 LOC100810184 LOC100808436 LOC100259626 LOC7496064 LOC11431277 LOC101263249 LOC102588743 LOC107777139 LOC4336393 LOC100281154 LOC123054010 LOC123046128 LOC123189897 LOC123427235 LOC8064489 LOC100839360 CHLRE_19g750397v5
Function* plastid transcriptionally active 5 protein disulfide isomerase pTAC5, chloroplastic protein disulfide isomerase pTAC5, chloroplastic-like protein disulfide isomerase pTAC5, chloroplastic protein disulfide isomerase pTAC5, chloroplastic protein disulfide isomerase pTAC5, chloroplastic protein disulfide isomerase pTAC5, chloroplastic protein disulfide isomerase pTAC5, chloroplastic protein disulfide isomerase pTAC5, chloroplastic protein disulfide isomerase pTAC5, chloroplastic protein disulfide isomerase pTAC5, chloroplastic protein disulfide isomerase pTAC5, chloroplastic protein disulfide isomerase pTAC5, chloroplastic uncharacterized LOC102588743 protein disulfide isomerase pTAC5, chloroplastic protein disulfide isomerase pTAC5, chloroplastic peptidoglycan binding domain containing protein protein disulfide isomerase pTAC5, chloroplastic protein disulfide isomerase pTAC5, chloroplastic protein disulfide isomerase pTAC5, chloroplastic protein disulfide isomerase pTAC5, chloroplastic uncharacterized LOC8064489 protein disulfide isomerase pTAC5, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00710 Carbon fixation by Calvin cycle 3
bra01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 4
bna00030 Pentose phosphate pathway 4
bna00051 Fructose and mannose metabolism 4
bna00710 Carbon fixation by Calvin cycle 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 4
bna00030 Pentose phosphate pathway 4
bna00051 Fructose and mannose metabolism 4
bna00710 Carbon fixation by Calvin cycle 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00740 Riboflavin metabolism 2
gma01240 Biosynthesis of cofactors 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 4
tae01240 Biosynthesis of cofactors 4
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00730 Thiamine metabolism 3
sbi01240 Biosynthesis of cofactors 3
sbi04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827001 103863611 106388403 106426998 107897755 107914841 102613832 100810184 100808436 100259626 7496064 11431277 101263249 102588743 107777139 4336393 100281154 123054010 123046128 123189897 123427235 8064489 100839360 5729183
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