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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   SGT1A   phosphatase-like protein 
 ath-u.5   SGT1A   phosphatase-like protein 
 ath-r.7   SGT1A   phosphatase-like protein 
 ath-e.2   SGT1A   phosphatase-like protein 
 ath-m.4.bio   SGT1A   phosphatase-like protein 
 ath-m.4.hor   SGT1A   phosphatase-like protein 
 ath-m.4.lig   SGT1A   phosphatase-like protein 
 ath-m.4.str   SGT1A   phosphatase-like protein 
 ath-m.4.tis   SGT1A   phosphatase-like protein 
 ath-u.5   SGT1B   phosphatase-like protein 
 bra-r.6   103861407   protein SGT1 homolog A 
 bra-r.6   103833887   protein SGT1 homolog B 
 bra-r.6   103858599   protein SGT1 homolog B 
 bna-r.1   106440530   protein SGT1 homolog A 
 bna-r.1   106438799   protein SGT1 homolog B 
 bna-r.1   106434696   protein SGT1 homolog A 
 ghi-r.1   107944433   protein SGT1 homolog B 
 ghi-r.1   107942356   protein SGT1 homolog B 
 ghi-r.1   107951829   protein SGT1 homolog B 
 cit-r.1   102623505   protein SGT1 homolog B 
 gma-u.5   100777554   protein SGT1 homolog B-like 
 gma-u.5   100194421   SGT1-2 
 gma-u.5   100780174   protein SGT1 homolog 
 vvi-u.5   100244083   protein SGT1 homolog 
 ppo-u.5   7468358   protein SGT1 homolog 
 ppo-u.5   18106438   protein SGT1 homolog 
 mtr-u.5   11436240   protein SGT1 homolog A 
 mtr-u.5   25496516   protein SGT1 homolog A 
 sly-u.5   101258374   protein SGT1 homolog A-like 
 sot-r.1   102599444   protein SGT1 homolog 
 sot-r.1   102579484   protein SGT1 homolog A-like 
 nta-r.1   107809968   protein SGT1 homolog 
 nta-r.1   107786122   protein SGT1 homolog 
 osa-u.5   4326682   protein SGT1 homolog 
 zma-u.5   103636097   protein SGT1 homolog 
 zma-u.5   100282745   uncharacterized LOC100282745 
 tae-r.2   123061535   protein SGT1 homolog 
 tae-r.2   123070173   protein SGT1 homolog 
 tae-r.2   100049034   protein SGT1 homolog 
 hvu-r.1   123443917   protein SGT1 homolog 
 sbi-r.1   8084854   protein SGT1 homolog 
 bdi-r.1   100838478   protein SGT1 homolog 
 cre-r.1   CHLRE_12g513600v5   uncharacterized protein 

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Top 50 coexpressed genes to SGT1A (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SGT1A (ath-m.9 coexpression data)

CoexMap"828457"


athSGT1A | Entrez gene ID : 828457      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 3 1 3 1 2 2 1 2 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04626 [list] [network] Plant-pathogen interaction (216 genes)
GO BP
GO:1900150 [list] [network] regulation of defense response to fungus  (39 genes)  IMP  
GO:0071365 [list] [network] cellular response to auxin stimulus  (93 genes)  IMP  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (219 genes)  ISS  
GO:0071456 [list] [network] cellular response to hypoxia  (241 genes)  HEP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IGI  
GO:0006952 [list] [network] defense response  (1016 genes)  IMP  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (41 genes)  ISS  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA ISM  
GO MF
GO:0051087 [list] [network] protein-folding chaperone binding  (15 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001031704.1 [sequence] [blastp]
NP_194088.1 [sequence] [blastp]
NP_849429.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 4,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_001031704.1)
chlo 5,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_194088.1)
chlo 5,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_849429.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031704.1)
other 8  (predict for NP_194088.1)
other 8  (predict for NP_849429.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
SGT1A
ath-u.5
for
SGT1A
ath-r.7
for
SGT1A
ath-e.2
for
SGT1A
ath-m.4.bio
for
SGT1A
ath-m.4.hor
for
SGT1A
ath-m.4.lig
for
SGT1A
ath-m.4.str
for
SGT1A
ath-m.4.tis
for
SGT1A
ath-u.5
for
SGT1B
bra-r.6
for
103861407
bra-r.6
for
103833887
bra-r.6
for
103858599
bna-r.1
for
106440530
bna-r.1
for
106438799
bna-r.1
for
106434696
ghi-r.1
for
107944433
ghi-r.1
for
107942356
ghi-r.1
for
107951829
cit-r.1
for
102623505
gma-u.5
for
100777554
gma-u.5
for
100194421
gma-u.5
for
100780174
vvi-u.5
for
100244083
ppo-u.5
for
7468358
ppo-u.5
for
18106438
mtr-u.5
for
11436240
mtr-u.5
for
25496516
sly-u.5
for
101258374
sot-r.1
for
102599444
sot-r.1
for
102579484
nta-r.1
for
107809968
nta-r.1
for
107786122
osa-u.5
for
4326682
zma-u.5
for
103636097
zma-u.5
for
100282745
tae-r.2
for
123061535
tae-r.2
for
123070173
tae-r.2
for
100049034
hvu-r.1
for
123443917
sbi-r.1
for
8084854
bdi-r.1
for
100838478
cre-r.1
for
CHLRE_12g513600v5


Ortholog ID: 3954
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol SGT1A SGT1B LOC103861407 LOC103833887 LOC103858599 LOC106440530 LOC106422380 LOC106366226 LOC107942356 LOC107917913 LOC107914611 LOC102623505 LOC100777554 LOC100194421 LOC100194420 LOC100244083 LOC7468358 LOC18106438 LOC11436240 LOC25496516 LOC101258374 LOC102599444 LOC102579484 LOC107809968 LOC107786122 LOC4326682 LOC103636097 LOC100282745 LOC123061535 LOC123070173 LOC100049034 LOC123443917 LOC8084854 LOC100838478 CHLRE_12g513600v5
Function* phosphatase-like protein phosphatase-like protein protein SGT1 homolog A protein SGT1 homolog B protein SGT1 homolog B protein SGT1 homolog A protein SGT1 homolog B protein SGT1 homolog B protein SGT1 homolog B protein SGT1 homolog B protein SGT1 homolog B protein SGT1 homolog B protein SGT1 homolog B-like SGT1-2 SGT1-1 protein SGT1 homolog protein SGT1 homolog protein SGT1 homolog protein SGT1 homolog A protein SGT1 homolog A protein SGT1 homolog A-like protein SGT1 homolog protein SGT1 homolog A-like protein SGT1 homolog protein SGT1 homolog protein SGT1 homolog protein SGT1 homolog uncharacterized LOC100282745 protein SGT1 homolog protein SGT1 homolog protein SGT1 homolog protein SGT1 homolog protein SGT1 homolog protein SGT1 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 5
ath03040 Spliceosome 3
ath04144 Endocytosis 2
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 5
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 9
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 5
bna00053 Ascorbate and aldarate metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 5
bna04626 Plant-pathogen interaction 4
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 4
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 5
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 5
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 5
ghi03060 Protein export 2
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 6
vvi04626 Plant-pathogen interaction 2
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 3
ppo04144 Endocytosis 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 6
mtr04626 Plant-pathogen interaction 4
mtr03040 Spliceosome 3
mtr04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 5
mtr04141 Protein processing in endoplasmic reticulum 4
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta04141 Protein processing in endoplasmic reticulum 4
nta04144 Endocytosis 4
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta04141 Protein processing in endoplasmic reticulum 4
nta04144 Endocytosis 4
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 5
osa04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 3
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
zma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04130 SNARE interactions in vesicular transport 2
hvu04626 Plant-pathogen interaction 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 5
bdi04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 7
cre03040 Spliceosome 2
cre04144 Endocytosis 2
cre03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828457 826728 103861407 103833887 103858599 106440530 106422380 106366226 107942356 107917913 107914611 102623505 100777554 100194421 100194420 100244083 7468358 18106438 11436240 25496516 101258374 102599444 102579484 107809968 107786122 4326682 103636097 100282745 123061535 123070173 100049034 123443917 8084854 100838478 5728516
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