Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AFB4   RNI-like superfamily protein 
 ath-u.5   AFB4   RNI-like superfamily protein 
 ath-r.7   AFB4   RNI-like superfamily protein 
 ath-e.2   AFB4   RNI-like superfamily protein 
 ath-m.4.bio   AFB4   RNI-like superfamily protein 
 ath-m.4.hor   AFB4   RNI-like superfamily protein 
 ath-m.4.lig   AFB4   RNI-like superfamily protein 
 ath-m.4.str   AFB4   RNI-like superfamily protein 
 ath-m.4.tis   AFB4   RNI-like superfamily protein 
 ath-u.5   AFB5   auxin F-box protein 5 
 bra-r.6   103858427   transport inhibitor response 1-like protein 
 bra-r.6   103862050   F-box protein FBX14 
 bna-r.1   106448164   transport inhibitor response 1-like protein 
 bna-r.1   106388488   transport inhibitor response 1-like protein 
 bna-r.1   106396509   F-box protein FBX14-like 
 ghi-r.1   107905067   transport inhibitor response 1-like protein 
 ghi-r.1   107957800   transport inhibitor response 1-like protein 
 ghi-r.1   121218215   transport inhibitor response 1-like protein 
 cit-r.1   102608296   transport inhibitor response 1-like protein 
 gma-u.5   100775877   transport inhibitor response 1-like protein 
 gma-u.5   100776213   transport inhibitor response 1-like protein 
 gma-u.5   100799915   transport inhibitor response 1-like protein 
 vvi-u.5   100245501   transport inhibitor response 1-like protein 
 ppo-u.5   7467186   transport inhibitor response 1-like protein 
 ppo-u.5   7486562   transport inhibitor response 1-like protein 
 mtr-u.5   11435177   transport inhibitor response 1-like protein 
 mtr-u.5   11433686   transport inhibitor response 1-like protein 
 sly-u.5   100316900   LeTIR 
 sot-r.1   102578575   transport inhibitor response 1-like protein 
 nta-r.1   107832817   transport inhibitor response 1-like protein 
 nta-r.1   107764726   transport inhibitor response 1-like protein 
 osa-u.5   4330795   transport inhibitor response 1-like protein 
 zma-u.5   100279510   uncharacterized LOC100279510 
 zma-u.5   100381660   F-box protein FBX14 
 tae-r.2   123128446   transport inhibitor response 1-like protein 
 tae-r.2   123138323   transport inhibitor response 1-like protein 
 tae-r.2   123145569   transport inhibitor response 1-like protein 
 hvu-r.1   123401012   transport inhibitor response 1-like protein 
 hvu-r.1   123406992   transport inhibitor response 1-like protein 
 sbi-r.1   8075184   F-box protein FBX14 
 bdi-r.1   100841538   transport inhibitor response 1-like protein 
 bdi-r.1   100841232   transport inhibitor response 1-like protein 

close


Top 50 coexpressed genes to AFB4 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AFB4 (ath-m.9 coexpression data)

CoexMap"828541"


athAFB4 | Entrez gene ID : 828541      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 3 3 1 3 1 2 2 1 1 2 1 2 3 2 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009734 [list] [network] auxin-activated signaling pathway  (65 genes)  ISS  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (219 genes)  TAS  
GO:0009733 [list] [network] response to auxin  (344 genes)  IMP  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (41 genes)  IPI ISS  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0038198 [list] [network] auxin receptor activity  (6 genes)  IPI  
GO:0000822 [list] [network] inositol hexakisphosphate binding  (7 genes)  ISS  
GO:0010011 [list] [network] auxin binding  (10 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_567702.2 [sequence] [blastp]
NP_974607.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto_nucl 4,  chlo 1  (predict for NP_567702.2)
nucl 7,  cyto_nucl 4,  chlo 1  (predict for NP_974607.1)
Subcellular
localization
TargetP
chlo 6,  other 5  (predict for NP_567702.2)
chlo 6,  other 5  (predict for NP_974607.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AFB4
ath-u.5
for
AFB4
ath-r.7
for
AFB4
ath-e.2
for
AFB4
ath-m.4.bio
for
AFB4
ath-m.4.hor
for
AFB4
ath-m.4.lig
for
AFB4
ath-m.4.str
for
AFB4
ath-m.4.tis
for
AFB4
ath-u.5
for
AFB5
bra-r.6
for
103858427
bra-r.6
for
103862050
bna-r.1
for
106448164
bna-r.1
for
106388488
bna-r.1
for
106396509
ghi-r.1
for
107905067
ghi-r.1
for
107957800
ghi-r.1
for
121218215
cit-r.1
for
102608296
gma-u.5
for
100775877
gma-u.5
for
100776213
gma-u.5
for
100799915
vvi-u.5
for
100245501
ppo-u.5
for
7467186
ppo-u.5
for
7486562
mtr-u.5
for
11435177
mtr-u.5
for
11433686
sly-u.5
for
100316900
sot-r.1
for
102578575
nta-r.1
for
107832817
nta-r.1
for
107764726
osa-u.5
for
4330795
zma-u.5
for
100279510
zma-u.5
for
100381660
tae-r.2
for
123128446
tae-r.2
for
123138323
tae-r.2
for
123145569
hvu-r.1
for
123401012
hvu-r.1
for
123406992
sbi-r.1
for
8075184
bdi-r.1
for
100841538
bdi-r.1
for
100841232


Ortholog ID: 4955
Species ath ath bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma zma tae tae tae hvu hvu sbi bdi bdi
Symbol AFB4 AFB5 LOC103858427 LOC103862050 LOC106448164 LOC106388488 LOC106396509 LOC107905067 LOC107957800 LOC121218215 LOC102608296 LOC100776213 LOC100799915 LOC100807836 LOC100245501 LOC7467186 LOC7486562 LOC11435177 LOC11433686 LOC100316900 LOC102578575 LOC107832817 LOC107764726 LOC4330795 LOC100279510 LOC100381660 LOC123138323 LOC123153170 LOC123156229 LOC123401012 LOC123406992 LOC8075184 LOC100841538 LOC100841232
Function* RNI-like superfamily protein auxin F-box protein 5 transport inhibitor response 1-like protein F-box protein FBX14 transport inhibitor response 1-like protein transport inhibitor response 1-like protein F-box protein FBX14-like transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein LeTIR transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein uncharacterized LOC100279510 F-box protein FBX14 transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein F-box protein FBX14 transport inhibitor response 1-like protein transport inhibitor response 1-like protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00051 Fructose and mannose metabolism 2
gma00541 Biosynthesis of various nucleotide sugars 2
gma01250 Biosynthesis of nucleotide sugars 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr00290 Valine, leucine and isoleucine biosynthesis 2
mtr00650 Butanoate metabolism 2
mtr00660 C5-Branched dibasic acid metabolism 2
mtr00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 4
sly04382 Cornified envelope formation 4
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
sot04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04814 Motor proteins 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 7
tae04141 Protein processing in endoplasmic reticulum 4
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03020 RNA polymerase 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
bdi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828541 835062 103858427 103862050 106448164 106388488 106396509 107905067 107957800 121218215 102608296 100776213 100799915 100807836 100245501 7467186 7486562 11435177 11433686 100316900 102578575 107832817 107764726 4330795 100279510 100381660 123138323 123153170 123156229 123401012 123406992 8075184 100841538 100841232
The preparation time of this page was 0.1 [sec].