ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	AT4G25900	Galactose mutarotase-like superfamily protein
ath-u.5	AT4G25900	Galactose mutarotase-like superfamily protein
ath-r.7	AT4G25900	Galactose mutarotase-like superfamily protein
ath-e.2	AT4G25900	Galactose mutarotase-like superfamily protein
ath-m.4.bio	AT4G25900	Galactose mutarotase-like superfamily protein
ath-m.4.hor	AT4G25900	Galactose mutarotase-like superfamily protein
ath-m.4.lig	AT4G25900	Galactose mutarotase-like superfamily protein
ath-m.4.str	AT4G25900	Galactose mutarotase-like superfamily protein
ath-m.4.tis	AT4G25900	Galactose mutarotase-like superfamily protein
ath-u.5	AT3G01590	Galactose mutarotase-like superfamily protein
ath-u.5	AT3G61610	Galactose mutarotase-like superfamily protein
ath-u.5	AT4G23730	Galactose mutarotase-like superfamily protein
bra-r.6	103863671	putative glucose-6-phosphate 1-epimerase
bra-r.6	103864004	putative glucose-6-phosphate 1-epimerase
bna-r.1	106444679	putative glucose-6-phosphate 1-epimerase
bna-r.1	106452556	putative glucose-6-phosphate 1-epimerase
bna-r.1	125580514	putative glucose-6-phosphate 1-epimerase
ghi-r.1	107909773	putative glucose-6-phosphate 1-epimerase
ghi-r.1	107908756	putative glucose-6-phosphate 1-epimerase
ghi-r.1	107906016	putative glucose-6-phosphate 1-epimerase
cit-r.1	102620138	putative glucose-6-phosphate 1-epimerase
cit-r.1	102615193	putative glucose-6-phosphate 1-epimerase
cit-r.1	102608391	putative glucose-6-phosphate 1-epimerase
gma-u.5	100801977	putative glucose-6-phosphate 1-epimerase-like
gma-u.5	100807970	putative glucose-6-phosphate 1-epimerase
gma-u.5	100809080	putative glucose-6-phosphate 1-epimerase
vvi-u.5	100266308	putative glucose-6-phosphate 1-epimerase
vvi-u.5	100259893	putative glucose-6-phosphate 1-epimerase
vvi-u.5	100248350	putative glucose-6-phosphate 1-epimerase
ppo-u.5	7479276	putative glucose-6-phosphate 1-epimerase
ppo-u.5	7462828	putative glucose-6-phosphate 1-epimerase
ppo-u.5	7461572	putative glucose-6-phosphate 1-epimerase
mtr-u.5	11431767	putative glucose-6-phosphate 1-epimerase
mtr-u.5	11426124	putative glucose-6-phosphate 1-epimerase
sly-u.5	101265043	putative glucose-6-phosphate 1-epimerase
sly-u.5	101249960	putative glucose-6-phosphate 1-epimerase
sly-u.5	101255458	putative glucose-6-phosphate 1-epimerase
sot-r.1	102580708	putative glucose-6-phosphate 1-epimerase
sot-r.1	102597354	putative glucose-6-phosphate 1-epimerase
nta-r.1	107760936	putative glucose-6-phosphate 1-epimerase
nta-r.1	107770947	putative glucose-6-phosphate 1-epimerase
nta-r.1	107765053	putative glucose-6-phosphate 1-epimerase
osa-u.5	4327164	putative glucose-6-phosphate 1-epimerase
osa-u.5	9269126	putative glucose-6-phosphate 1-epimerase
zma-u.5	100282738	apospory-associated protein C
zma-u.5	100282752	uncharacterized LOC100282752
zma-u.5	100194404	uncharacterized LOC100194404
tae-r.2	123144108	putative glucose-6-phosphate 1-epimerase
tae-r.2	123054394	putative glucose-6-phosphate 1-epimerase
tae-r.2	123047018	putative glucose-6-phosphate 1-epimerase
hvu-r.1	123427707	putative glucose-6-phosphate 1-epimerase
hvu-r.1	123428073	putative glucose-6-phosphate 1-epimerase
hvu-r.1	123404659	putative glucose-6-phosphate 1-epimerase
sbi-r.1	8072286	putative glucose-6-phosphate 1-epimerase
sbi-r.1	8058267	putative glucose-6-phosphate 1-epimerase
bdi-r.1	100822970	putative glucose-6-phosphate 1-epimerase
bdi-r.1	100834458	putative glucose-6-phosphate 1-epimerase
bdi-r.1	100835217	putative glucose-6-phosphate 1-epimerase
cre-r.1	CHLRE_07g347100v5	uncharacterized protein

Top 50 coexpressed genes to AT4G25900 (ath-m.9 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT4G25900 (ath-m.9 coexpression data)

CoexMap"828696"

[Cytoscape]

Annotation

functional annotation

KEGG

ath00010 [list] [network] Glycolysis / Gluconeogenesis (119 genes)

GO BP

GO:0005975 [list] [network] carbohydrate metabolic process

(601 genes)

IEA

GO CC

GO:0099503 [list] [network] secretory vesicle	(172 genes)	HDA
GO:0009505 [list] [network] plant-type cell wall	(504 genes)	HDA
GO:0005829 [list] [network] cytosol	(2593 genes)	HDA
GO:0005886 [list] [network] plasma membrane	(2598 genes)	HDA
GO:0005576 [list] [network] extracellular region	(3158 genes)	ISM

GO MF

GO:0047938 [list] [network] glucose-6-phosphate 1-epimerase activity

(7 genes)

IEA

Protein

NP_567734.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, cyto 2, E.R. 2, cyto_E.R. 2

(predict for NP_567734.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_567734.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AT4G25900	ath-u.5 for AT4G25900	ath-r.7 for AT4G25900	ath-e.2 for AT4G25900	ath-m.4.bio for AT4G25900	ath-m.4.hor for AT4G25900	ath-m.4.lig for AT4G25900	ath-m.4.str for AT4G25900	ath-m.4.tis for AT4G25900	ath-u.5 for AT3G01590	ath-u.5 for AT3G61610	ath-u.5 for AT4G23730	bra-r.6 for 103863671	bra-r.6 for 103864004	bna-r.1 for 106444679	bna-r.1 for 106452556	bna-r.1 for 125580514	ghi-r.1 for 107909773	ghi-r.1 for 107908756	ghi-r.1 for 107906016	cit-r.1 for 102620138	cit-r.1 for 102615193	cit-r.1 for 102608391	gma-u.5 for 100801977	gma-u.5 for 100807970	gma-u.5 for 100809080	vvi-u.5 for 100266308	vvi-u.5 for 100259893	vvi-u.5 for 100248350	ppo-u.5 for 7479276	ppo-u.5 for 7462828	ppo-u.5 for 7461572	mtr-u.5 for 11431767	mtr-u.5 for 11426124	sly-u.5 for 101265043	sly-u.5 for 101249960	sly-u.5 for 101255458	sot-r.1 for 102580708	sot-r.1 for 102597354	nta-r.1 for 107760936	nta-r.1 for 107770947	nta-r.1 for 107765053	osa-u.5 for 4327164	osa-u.5 for 9269126	zma-u.5 for 100282738	zma-u.5 for 100282752	zma-u.5 for 100194404	tae-r.2 for 123144108	tae-r.2 for 123054394	tae-r.2 for 123047018	hvu-r.1 for 123427707	hvu-r.1 for 123428073	hvu-r.1 for 123404659	sbi-r.1 for 8072286	sbi-r.1 for 8058267	bdi-r.1 for 100822970	bdi-r.1 for 100834458	bdi-r.1 for 100835217	cre-r.1 for CHLRE_07g347100v5

Ortholog

Ortholog ID: 370

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

Galactose mutarotase-like superfamily protein

aldose 1-epimerase family protein

putative glucose-6-phosphate 1-epimerase

putative glucose-6-phosphate 1-epimerase-like

putative glucose-6-phosphate 1-epimerase

uncharacterized LOC100194404

apospory-associated protein C

putative glucose-6-phosphate 1-epimerase

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	6
ath00020	Citrate cycle (TCA cycle)	4
ath01210	2-Oxocarboxylic acid metabolism	4
ath00630	Glyoxylate and dicarboxylate metabolism	3
ath00640	Propanoate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	3
ath04146	Peroxisome	2
ath00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04145	Phagosome	3
bra04517	IgSF CAM signaling	3
bra04814	Motor proteins	3
bra04016	MAPK signaling pathway - plant	2
bra04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01250	Biosynthesis of nucleotide sugars	5
bra00520	Amino sugar and nucleotide sugar metabolism	4
bra00541	Biosynthesis of various nucleotide sugars	3
bra00040	Pentose and glucuronate interconversions	2
bra00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00905	Brassinosteroid biosynthesis	3
ghi00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	6
ghi00600	Sphingolipid metabolism	2
ghi00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00905	Brassinosteroid biosynthesis	3
ghi00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	2
gma00541	Biosynthesis of various nucleotide sugars	2
gma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	5
vvi03050	Proteasome	3
vvi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	2
mtr04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	7
sly04145	Phagosome	5
sly04142	Lysosome	4
sly00010	Glycolysis / Gluconeogenesis	2
sly00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00620	Pyruvate metabolism	2
sot00710	Carbon fixation by Calvin cycle	2
sot01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	2
nta00010	Glycolysis / Gluconeogenesis	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	4
nta03015	mRNA surveillance pathway	4
nta00591	Linoleic acid metabolism	2
nta00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04148	Efferocytosis	2
osa00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	6
tae00541	Biosynthesis of various nucleotide sugars	3
tae01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	6
tae00541	Biosynthesis of various nucleotide sugars	3
tae01250	Biosynthesis of nucleotide sugars	3
tae00052	Galactose metabolism	3
tae00561	Glycerolipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	5
bdi04145	Phagosome	4
bdi04148	Efferocytosis	4

Expression

Expression pattern

Entrez Gene ID^*

828696

828473

831301

103856758

103845172

103830313

106375983

106346523

106346522

107897907

107958327

107926065

102615193

102608391

102617753

100807970

100787970

100787217

100266308

100259893

100248350

7476801

7457379

7487879

11438410

11439651

101265043

101255458

101265664

102580708

102600001

102592943

107760936

107799612

107819313

9269126

4337265

100194404

100282376

123054850

123155984

123190285

123427707

123404659

123407371

8072286

8073234

100834458

100835217

100843931

5718028

The preparation time of this page was 3.4 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	12	2	3	3	3	3	3	3	2	3	2	3	2	3	3	3	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT4G25900 (ath-m.9 coexpression data)

Top 50 enrichment test to AT4G25900 (ath-m.9 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**