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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   FADA   fatty acid desaturase A 
 ath-u.5   FADA   fatty acid desaturase A 
 ath-r.7   FADA   fatty acid desaturase A 
 ath-e.2   FADA   fatty acid desaturase A 
 ath-m.4.bio   FADA   fatty acid desaturase A 
 ath-m.4.hor   FADA   fatty acid desaturase A 
 ath-m.4.lig   FADA   fatty acid desaturase A 
 ath-m.4.str   FADA   fatty acid desaturase A 
 ath-m.4.tis   FADA   fatty acid desaturase A 
 ath-u.5   AT2G22890   Kua-ubiquitin conjugating enzyme hybrid localization domain-containing protein 
 bra-r.6   103861670   fatty acid desaturase 4-like 2, chloroplastic 
 bra-r.6   103834822   fatty acid desaturase 4, chloroplastic-like 
 bra-r.6   103866795   fatty acid desaturase 4, chloroplastic 
 bna-r.1   106445558   fatty acid desaturase 4, chloroplastic-like 
 bna-r.1   106444859   fatty acid desaturase 4, chloroplastic 
 ghi-r.1   107933433   fatty acid desaturase 4, chloroplastic 
 ghi-r.1   107916746   fatty acid desaturase 4, chloroplastic 
 cit-r.1   102608519   fatty acid desaturase 4, chloroplastic 
 gma-u.5   100795628   fatty acid desaturase 4, chloroplastic 
 gma-u.5   100793638   fatty acid desaturase 4, chloroplastic 
 vvi-u.5   100257229   fatty acid desaturase 4, chloroplastic 
 ppo-u.5   18095957   fatty acid desaturase 4, chloroplastic 
 mtr-u.5   11423698   fatty acid desaturase 4, chloroplastic 
 sly-u.5   101252202   fatty acid desaturase 4, chloroplastic 
 sot-r.1   102586585   fatty acid desaturase 4, chloroplastic-like 
 nta-r.1   107788973   fatty acid desaturase 4, chloroplastic-like 
 nta-r.1   107760919   fatty acid desaturase 4-like 1, chloroplastic 
 osa-u.5   107277927   fatty acid desaturase 4, chloroplastic 
 zma-u.5   103641109   fatty acid desaturase 4, chloroplastic 
 tae-r.2   123143728   fatty acid desaturase 4, chloroplastic 
 tae-r.2   123136224   fatty acid desaturase 4, chloroplastic-like 
 tae-r.2   123132194   fatty acid desaturase 4, chloroplastic 
 hvu-r.1   123404009   fatty acid desaturase 4, chloroplastic-like 
 sbi-r.1   8071119   fatty acid desaturase 4, chloroplastic 
 cre-r.1   CHLRE_16g673001v5   uncharacterized protein 

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Top 50 coexpressed genes to FADA (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to FADA (ath-m.9 coexpression data)

CoexMap"828811"


athFADA | Entrez gene ID : 828811      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi cre bdi
Paralog 10 3 2 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0046471 [list] [network] phosphatidylglycerol metabolic process  (7 genes)  IMP  
GO:0006636 [list] [network] unsaturated fatty acid biosynthetic process  (12 genes)  IMP  
GO CC
GO:0031969 [list] [network] chloroplast membrane  (123 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA ISM NAS  
GO MF
GO:0102654 [list] [network] palmitoyl-[glycerolipid] 3-(E)-desaturase activity  (1 genes)  IDA IEA IMP  
Protein NP_194433.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3  (predict for NP_194433.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_194433.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
FADA
ath-u.5
for
FADA
ath-r.7
for
FADA
ath-e.2
for
FADA
ath-m.4.bio
for
FADA
ath-m.4.hor
for
FADA
ath-m.4.lig
for
FADA
ath-m.4.str
for
FADA
ath-m.4.tis
for
FADA
ath-u.5
for
AT2G22890
bra-r.6
for
103861670
bra-r.6
for
103834822
bra-r.6
for
103866795
bna-r.1
for
106445558
bna-r.1
for
106444859
ghi-r.1
for
107933433
ghi-r.1
for
107916746
cit-r.1
for
102608519
gma-u.5
for
100795628
gma-u.5
for
100793638
vvi-u.5
for
100257229
ppo-u.5
for
18095957
mtr-u.5
for
11423698
sly-u.5
for
101252202
sot-r.1
for
102586585
nta-r.1
for
107788973
nta-r.1
for
107760919
osa-u.5
for
107277927
zma-u.5
for
103641109
tae-r.2
for
123143728
tae-r.2
for
123136224
tae-r.2
for
123132194
hvu-r.1
for
123404009
sbi-r.1
for
8071119
cre-r.1
for
CHLRE_16g673001v5


Ortholog ID: 5260
Species ath ath bra bra bra bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi cre
Symbol FADA AT2G22890 LOC103861670 LOC103866795 LOC103835525 LOC106410515 LOC107933433 LOC107916746 LOC102608519 LOC100795628 LOC100793638 LOC100257229 LOC18095957 LOC11423698 LOC101252202 LOC102586585 LOC107788973 LOC107760919 LOC107277927 LOC103641109 LOC123143728 LOC123136224 LOC123132194 LOC123404009 LOC8071119 CHLRE_16g673001v5
Function* fatty acid desaturase A Kua-ubiquitin conjugating enzyme hybrid localization domain-containing protein fatty acid desaturase 4-like 2, chloroplastic fatty acid desaturase 4, chloroplastic fatty acid desaturase 4, chloroplastic-like fatty acid desaturase 4-like 2, chloroplastic fatty acid desaturase 4, chloroplastic fatty acid desaturase 4, chloroplastic fatty acid desaturase 4, chloroplastic fatty acid desaturase 4, chloroplastic fatty acid desaturase 4, chloroplastic fatty acid desaturase 4, chloroplastic fatty acid desaturase 4, chloroplastic fatty acid desaturase 4, chloroplastic fatty acid desaturase 4, chloroplastic fatty acid desaturase 4, chloroplastic-like fatty acid desaturase 4, chloroplastic-like fatty acid desaturase 4-like 1, chloroplastic fatty acid desaturase 4, chloroplastic fatty acid desaturase 4, chloroplastic fatty acid desaturase 4, chloroplastic fatty acid desaturase 4, chloroplastic-like fatty acid desaturase 4, chloroplastic fatty acid desaturase 4, chloroplastic-like fatty acid desaturase 4, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 2
ath00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00380 Tryptophan metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra04016 MAPK signaling pathway - plant 3
bra04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00010 Glycolysis / Gluconeogenesis 2
bra00030 Pentose phosphate pathway 2
bra00051 Fructose and mannose metabolism 2
bra00052 Galactose metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 4
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 4
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828811 816820 103861670 103866795 103835525 106410515 107933433 107916746 102608519 100795628 100793638 100257229 18095957 11423698 101252202 102586585 107788973 107760919 107277927 103641109 123143728 123136224 123132194 123404009 8071119 5721412
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