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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT4G27240   zinc finger (C2H2 type) family protein 
 ath-u.5   AT4G27240   zinc finger (C2H2 type) family protein 
 ath-r.7   AT4G27240   zinc finger (C2H2 type) family protein 
 ath-e.2   AT4G27240   zinc finger (C2H2 type) family protein 
 ath-m.4.bio   AT4G27240   zinc finger (C2H2 type) family protein 
 ath-m.4.hor   AT4G27240   zinc finger (C2H2 type) family protein 
 ath-m.4.lig   AT4G27240   zinc finger (C2H2 type) family protein 
 ath-m.4.str   AT4G27240   zinc finger (C2H2 type) family protein 
 ath-m.4.tis   AT4G27240   zinc finger (C2H2 type) family protein 
 ath-u.5   AT5G54630   zinc finger protein-like protein 
 bra-r.6   103851949   uncharacterized LOC103851949 
 bra-r.6   103866964   uncharacterized LOC103866964 
 bna-r.1   106445758   uncharacterized LOC106445758 
 ghi-r.1   107917940   uncharacterized LOC107917940 
 ghi-r.1   107932630   uncharacterized LOC107932630 
 cit-r.1   102608520   uncharacterized LOC102608520 
 gma-u.5   100785097   uncharacterized LOC100785097 
 gma-u.5   100787790   uncharacterized LOC100787790 
 gma-u.5   100800127   uncharacterized LOC100800127 
 vvi-u.5   100260605   uncharacterized LOC100260605 
 vvi-u.5   100244205   uncharacterized LOC100244205 
 ppo-u.5   18095881   uncharacterized LOC18095881 
 ppo-u.5   7454399   uncharacterized LOC7454399 
 mtr-u.5   11440887   uncharacterized LOC11440887 
 sly-u.5   101261138   uncharacterized LOC101261138 
 sly-u.5   101266475   uncharacterized LOC101266475 
 sot-r.1   102601024   uncharacterized LOC102601024 
 sot-r.1   102605244   uncharacterized LOC102605244 
 nta-r.1   107831486   uncharacterized LOC107831486 
 nta-r.1   107814927   uncharacterized LOC107814927 
 nta-r.1   107810946   uncharacterized LOC107810946 
 osa-u.5   4341867   uncharacterized LOC4341867 
 osa-u.5   4327046   uncharacterized LOC4327046 
 zma-u.5   100285506   uncharacterized LOC100285506 
 zma-u.5   100280447   uncharacterized LOC100280447 
 tae-r.2   123079406   uncharacterized LOC123079406 
 tae-r.2   123062275   uncharacterized LOC123062275 
 tae-r.2   123071032   uncharacterized LOC123071032 
 hvu-r.1   123440347   uncharacterized LOC123440347 
 sbi-r.1   8054725   uncharacterized LOC8054725 
 bdi-r.1   100825897   uncharacterized LOC100825897 

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Top 50 coexpressed genes to AT4G27240 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G27240 (ath-m.9 coexpression data)

CoexMap"828832"


athAT4G27240 | Entrez gene ID : 828832      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 1 2 1 3 2 2 1 2 2 3 2 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_001328336.1 [sequence] [blastp]
NP_567769.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001328336.1)
nucl 9,  cyto 1  (predict for NP_567769.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for NP_001328336.1)
other 7,  chlo 4  (predict for NP_567769.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT4G27240
ath-u.5
for
AT4G27240
ath-r.7
for
AT4G27240
ath-e.2
for
AT4G27240
ath-m.4.bio
for
AT4G27240
ath-m.4.hor
for
AT4G27240
ath-m.4.lig
for
AT4G27240
ath-m.4.str
for
AT4G27240
ath-m.4.tis
for
AT4G27240
ath-u.5
for
AT5G54630
bra-r.6
for
103851949
bra-r.6
for
103866964
bna-r.1
for
106445758
ghi-r.1
for
107917940
ghi-r.1
for
107932630
cit-r.1
for
102608520
gma-u.5
for
100785097
gma-u.5
for
100787790
gma-u.5
for
100800127
vvi-u.5
for
100260605
vvi-u.5
for
100244205
ppo-u.5
for
18095881
ppo-u.5
for
7454399
mtr-u.5
for
11440887
sly-u.5
for
101261138
sly-u.5
for
101266475
sot-r.1
for
102601024
sot-r.1
for
102605244
nta-r.1
for
107831486
nta-r.1
for
107814927
nta-r.1
for
107810946
osa-u.5
for
4341867
osa-u.5
for
4327046
zma-u.5
for
100285506
zma-u.5
for
100280447
tae-r.2
for
123079406
tae-r.2
for
123062275
tae-r.2
for
123071032
hvu-r.1
for
123440347
sbi-r.1
for
8054725
bdi-r.1
for
100825897


Ortholog ID: 4769
Species ath ath bra bra bna bna ghi ghi cit gma gma gma vvi vvi ppo ppo mtr sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu sbi bdi
Symbol AT4G27240 AT5G54630 LOC103851949 LOC103866964 LOC106390079 LOC106376081 LOC107917940 LOC107932630 LOC102608520 LOC100787790 LOC100800127 LOC100816798 LOC100260605 LOC100244205 LOC18095881 LOC7454399 LOC11440887 LOC101261138 LOC101266475 LOC102601024 LOC102605244 LOC107814927 LOC107810946 LOC107816472 LOC4341867 LOC4327046 LOC100285506 LOC100280447 LOC123079406 LOC123062275 LOC123071032 LOC123440347 LOC8054725 LOC100825897
Function* zinc finger (C2H2 type) family protein zinc finger protein-like protein uncharacterized LOC103851949 uncharacterized LOC103866964 uncharacterized LOC106390079 uncharacterized LOC106376081 uncharacterized LOC107917940 uncharacterized LOC107932630 uncharacterized LOC102608520 uncharacterized LOC100787790 uncharacterized LOC100800127 uncharacterized LOC100816798 uncharacterized LOC100260605 uncharacterized LOC100244205 uncharacterized LOC18095881 uncharacterized LOC7454399 uncharacterized LOC11440887 uncharacterized LOC101261138 uncharacterized LOC101266475 uncharacterized LOC102601024 uncharacterized LOC102605244 uncharacterized LOC107814927 uncharacterized LOC107810946 uncharacterized LOC107816472 uncharacterized LOC4341867 uncharacterized LOC4327046 uncharacterized LOC100285506 uncharacterized LOC100280447 uncharacterized LOC123079406 uncharacterized LOC123062275 uncharacterized LOC123071032 uncharacterized LOC123440347 uncharacterized LOC8054725 uncharacterized LOC100825897
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 4
bna00260 Glycine, serine and threonine metabolism 2
bna00750 Vitamin B6 metabolism 2
bna01230 Biosynthesis of amino acids 2
bna00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00905 Brassinosteroid biosynthesis 2
ghi00460 Cyanoamino acid metabolism 2
ghi00500 Starch and sucrose metabolism 2
ghi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00905 Brassinosteroid biosynthesis 2
ghi00460 Cyanoamino acid metabolism 2
ghi00500 Starch and sucrose metabolism 2
ghi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 3
gma00020 Citrate cycle (TCA cycle) 3
gma00620 Pyruvate metabolism 3
gma00785 Lipoic acid metabolism 3
gma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04814 Motor proteins 3
vvi04145 Phagosome 2
vvi04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04517 IgSF CAM signaling 2
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04517 IgSF CAM signaling 2
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00073 Cutin, suberine and wax biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828832 835552 103851949 103866964 106390079 106376081 107917940 107932630 102608520 100787790 100800127 100816798 100260605 100244205 18095881 7454399 11440887 101261138 101266475 102601024 102605244 107814927 107810946 107816472 4341867 4327046 100285506 100280447 123079406 123062275 123071032 123440347 8054725 100825897
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