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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G04000   uncharacterized protein 
 ath-u.5   AT5G04000   uncharacterized protein 
 ath-r.7   AT5G04000   uncharacterized protein 
 ath-e.2   AT5G04000   uncharacterized protein 
 ath-m.4.bio   AT5G04000   uncharacterized protein 
 ath-m.4.hor   AT5G04000   uncharacterized protein 
 ath-m.4.lig   AT5G04000   uncharacterized protein 
 ath-m.4.str   AT5G04000   uncharacterized protein 
 ath-m.4.tis   AT5G04000   uncharacterized protein 
 bra-r.6   103847340   uncharacterized LOC103847340 
 bna-r.1   106370746   uncharacterized LOC106370746 
 bna-r.1   106370689   uncharacterized LOC106370689 
 ghi-r.1   107889423   uncharacterized LOC107889423 
 ghi-r.1   107891331   uncharacterized LOC107891331 
 cit-r.1   102611048   uncharacterized LOC102611048 
 gma-u.5   100797053   uncharacterized LOC100797053 
 gma-u.5   100305533   uncharacterized LOC100305533 
 vvi-u.5   100265785   uncharacterized LOC100265785 
 ppo-u.5   7473603   uncharacterized LOC7473603 
 mtr-u.5   11416135   uncharacterized LOC11416135 
 sly-u.5   101258357   uncharacterized LOC101258357 
 sot-r.1   102595586   uncharacterized LOC102595586 
 nta-r.1   107814890   uncharacterized LOC107814890 
 nta-r.1   107800707   uncharacterized LOC107800707 
 zma-u.5   100193361   Mediator of RNA polymerase II transcription subunit 23 
 tae-r.2   123171691   uncharacterized LOC123171691 
 tae-r.2   123094915   uncharacterized LOC123094915 
 hvu-r.1   123413455   uncharacterized LOC123413455 
 sbi-r.1   8077050   uncharacterized LOC8077050 
 bdi-r.1   100833070   uncharacterized LOC100833070 

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Top 50 coexpressed genes to AT5G04000 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G04000 (ath-m.9 coexpression data)

CoexMap"830279"


athAT5G04000 | Entrez gene ID : 830279      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta zma tae hvu sbi bdi osa cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 1 2 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001190220.1 [sequence] [blastp]
NP_196020.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  mito 2,  chlo 1,  cyto 1  (predict for NP_001190220.1)
nucl 4,  chlo 2,  mito 2,  chlo_mito 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_196020.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_001190220.1)
other 7  (predict for NP_196020.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G04000
ath-u.5
for
AT5G04000
ath-r.7
for
AT5G04000
ath-e.2
for
AT5G04000
ath-m.4.bio
for
AT5G04000
ath-m.4.hor
for
AT5G04000
ath-m.4.lig
for
AT5G04000
ath-m.4.str
for
AT5G04000
ath-m.4.tis
for
AT5G04000
bra-r.6
for
103847340
bna-r.1
for
106370746
bna-r.1
for
106370689
ghi-r.1
for
107889423
ghi-r.1
for
107891331
cit-r.1
for
102611048
gma-u.5
for
100797053
gma-u.5
for
100305533
vvi-u.5
for
100265785
ppo-u.5
for
7473603
mtr-u.5
for
11416135
sly-u.5
for
101258357
sot-r.1
for
102595586
nta-r.1
for
107814890
nta-r.1
for
107800707
zma-u.5
for
100193361
tae-r.2
for
123171691
tae-r.2
for
123094915
hvu-r.1
for
123413455
sbi-r.1
for
8077050
bdi-r.1
for
100833070


Ortholog ID: 10270
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta zma tae tae hvu sbi bdi
Symbol AT5G04000 LOC103847340 LOC106370746 LOC106370689 LOC107889423 LOC107891331 LOC102611048 LOC100797053 LOC100305533 LOC100265785 LOC7473603 LOC11416135 LOC101258357 LOC102595586 LOC107814890 LOC107800707 LOC100193361 LOC123171691 LOC123094915 LOC123413455 LOC8077050 LOC100833070
Function* uncharacterized protein uncharacterized LOC103847340 uncharacterized LOC106370746 uncharacterized LOC106370689 uncharacterized LOC107889423 uncharacterized LOC107891331 uncharacterized LOC102611048 uncharacterized LOC100797053 uncharacterized LOC100305533 uncharacterized LOC100265785 uncharacterized LOC7473603 uncharacterized LOC11416135 uncharacterized LOC101258357 uncharacterized LOC102595586 uncharacterized LOC107814890 uncharacterized LOC107800707 Mediator of RNA polymerase II transcription subunit 23 uncharacterized LOC123171691 uncharacterized LOC123094915 uncharacterized LOC123413455 uncharacterized LOC8077050 uncharacterized LOC100833070
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00280 Valine, leucine and isoleucine degradation 4
sly00260 Glycine, serine and threonine metabolism 2
sly00071 Fatty acid degradation 2
sly00310 Lysine degradation 2
sly00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 6
sot04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
zma03040 Spliceosome 2
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 5
tae00220 Arginine biosynthesis 3
tae01230 Biosynthesis of amino acids 3
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830279 103847340 106370746 106370689 107889423 107891331 102611048 100797053 100305533 100265785 7473603 11416135 101258357 102595586 107814890 107800707 100193361 123171691 123094915 123413455 8077050 100833070
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