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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9  AT5G04060  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-u.5  AT5G04060  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-r.7  AT5G04060  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-e.2  AT5G04060  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.bio  AT5G04060  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.hor  AT5G04060  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.lig  AT5G04060  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.str  AT5G04060  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.tis  AT5G04060  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-u.5  AT3G10200  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 gma-u.5  100789198  probable methyltransferase PMT7 
 gma-u.5  100800388  probable methyltransferase PMT6 
 vvi-u.5  100252113  probable methyltransferase PMT7 
 ppo-u.5  7496099  probable methyltransferase PMT6 
 mtr-u.5  25483283  probable methyltransferase PMT6 
 sly-u.5  101265688  probable methyltransferase PMT6 
 osa-u.5  4338624  probable methyltransferase PMT7 
 zma-u.5  100285434  ankyrin like protein 

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Top 50 coexpressed genes to AT5G04060 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G04060 (ath-m.9 coexpression data)

CoexMap"830285"


athAT5G04060 | Entrez gene ID : 830285
Species ath gma vvi ppo mtr sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 10 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005802 [list] [network] trans-Golgi network  (279 genes)  HDA  
GO:0005768 [list] [network] endosome  (359 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  HDA  
GO MF
Protein NP_196026.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 2,  plas 2,  vacu 2,  cyto_plas 2,  chlo 1,  cyto_nucl 1,  nucl_plas 1,  cyto_pero 1  (predict for NP_196026.1)
Subcellular
localization
TargetP
mito 2  (predict for NP_196026.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G04060


ath-u.5
for
AT5G04060


ath-r.7
for
AT5G04060


ath-e.2
for
AT5G04060


ath-m.4.bio
for
AT5G04060


ath-m.4.hor
for
AT5G04060


ath-m.4.lig
for
AT5G04060


ath-m.4.str
for
AT5G04060


ath-m.4.tis
for
AT5G04060


ath-u.5
for
AT3G10200


gma-u.5
for
100789198


gma-u.5
for
100800388


vvi-u.5
for
100252113


ppo-u.5
for
7496099


mtr-u.5
for
25483283


sly-u.5
for
101265688


osa-u.5
for
4338624


zma-u.5
for
100285434



Ortholog ID: 7203
Species ath ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot sot nta nta osa zma tae tae hvu sbi bdi
Symbol AT5G04060 AT3G10200 LOC103847333 LOC106372669 LOC106372517 LOC107958055 LOC107891555 LOC102607611 LOC100800388 LOC100789198 LOC100252113 LOC7496099 LOC25483283 LOC101265688 LOC102579536 LOC102596444 LOC107821126 LOC107779194 LOC4338624 LOC100285434 LOC123181833 LOC123053394 LOC123440048 LOC110430398 LOC100843966
Function* S-adenosyl-L-methionine-dependent methyltransferases superfamily protein S-adenosyl-L-methionine-dependent methyltransferases superfamily protein probable methyltransferase PMT7 probable methyltransferase PMT7 probable methyltransferase PMT7 probable methyltransferase PMT7 probable methyltransferase PMT7 probable methyltransferase PMT6 probable methyltransferase PMT6 probable methyltransferase PMT7 probable methyltransferase PMT7 probable methyltransferase PMT6 probable methyltransferase PMT6 probable methyltransferase PMT6 probable methyltransferase PMT7 probable methyltransferase PMT6 putative methyltransferase PMT7 putative methyltransferase PMT7 probable methyltransferase PMT7 ankyrin like protein probable methyltransferase PMT7 probable methyltransferase PMT7 probable methyltransferase PMT7 probable methyltransferase PMT7 probable methyltransferase PMT7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00541 Biosynthesis of various nucleotide sugars 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr00510 N-Glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830285 820182 103847333 106372669 106372517 107958055 107891555 102607611 100800388 100789198 100252113 7496099 25483283 101265688 102579536 102596444 107821126 107779194 4338624 100285434 123181833 123053394 123440048 110430398 100843966
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