Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G05840   replication factor C subunit, putative (DUF620) 
 ath-u.5   AT5G05840   replication factor C subunit, putative (DUF620) 
 ath-r.7   AT5G05840   replication factor C subunit, putative (DUF620) 
 ath-e.2   AT5G05840   replication factor C subunit, putative (DUF620) 
 ath-m.4.bio   AT5G05840   replication factor C subunit, putative (DUF620) 
 ath-m.4.hor   AT5G05840   replication factor C subunit, putative (DUF620) 
 ath-m.4.lig   AT5G05840   replication factor C subunit, putative (DUF620) 
 ath-m.4.str   AT5G05840   replication factor C subunit, putative (DUF620) 
 ath-m.4.tis   AT5G05840   replication factor C subunit, putative (DUF620) 
 bra-r.6   103846924   uncharacterized LOC103846924 
 bna-r.1   106419449   uncharacterized LOC106419449 
 bna-r.1   BNAC09G49650D   uncharacterized BNAC09G49650D 
 ghi-r.1   107951592   uncharacterized LOC107951592 
 ghi-r.1   107935415   uncharacterized LOC107935415 
 cit-r.1   102617888   uncharacterized LOC102617888 
 gma-u.5   100782214   uncharacterized LOC100782214 
 gma-u.5   100815870   uncharacterized LOC100815870 
 vvi-u.5   100263234   uncharacterized LOC100263234 
 ppo-u.5   7490355   uncharacterized LOC7490355 
 ppo-u.5   7487995   uncharacterized LOC7487995 
 mtr-u.5   11415844   uncharacterized LOC11415844 
 mtr-u.5   11409666   uncharacterized LOC11409666 
 sly-u.5   101260516   uncharacterized LOC101260516 
 sly-u.5   101252286   uncharacterized LOC101252286 
 sot-r.1   102591372   uncharacterized LOC102591372 
 sot-r.1   107062158   uncharacterized LOC107062158 
 sot-r.1   102588896   uncharacterized LOC102588896 
 nta-r.1   107787550   uncharacterized LOC107787550 
 nta-r.1   107806459   uncharacterized LOC107806459 
 nta-r.1   107781827   uncharacterized LOC107781827 
 osa-u.5   4332365   uncharacterized LOC4332365 
 zma-u.5   100275600   uncharacterized LOC100275600 
 zma-u.5   100279315   uncharacterized LOC100279315 
 tae-r.2   123092637   uncharacterized LOC123092637 
 tae-r.2   123085398   uncharacterized LOC123085398 
 tae-r.2   123097947   uncharacterized LOC123097947 
 hvu-r.1   123449055   uncharacterized LOC123449055 
 sbi-r.1   8085601   uncharacterized LOC8085601 
 bdi-r.1   100840558   uncharacterized LOC100840558 

close


Top 50 coexpressed genes to AT5G05840 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT5G05840 (ath-m.9 coexpression data)

CoexMap"830469"


athAT5G05840 | Entrez gene ID : 830469      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 2 2 2 3 3 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_196203.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto_nucl 3,  nucl 2,  cyto 2,  chlo 2,  mito 1,  plas 1,  mito_plas 1  (predict for NP_196203.1)
Subcellular
localization
TargetP
other 7  (predict for NP_196203.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G05840
ath-u.5
for
AT5G05840
ath-r.7
for
AT5G05840
ath-e.2
for
AT5G05840
ath-m.4.bio
for
AT5G05840
ath-m.4.hor
for
AT5G05840
ath-m.4.lig
for
AT5G05840
ath-m.4.str
for
AT5G05840
ath-m.4.tis
for
AT5G05840
bra-r.6
for
103846924
bna-r.1
for
106419449
bna-r.1
for
BNAC09G49650D
ghi-r.1
for
107951592
ghi-r.1
for
107935415
cit-r.1
for
102617888
gma-u.5
for
100782214
gma-u.5
for
100815870
vvi-u.5
for
100263234
ppo-u.5
for
7490355
ppo-u.5
for
7487995
mtr-u.5
for
11415844
mtr-u.5
for
11409666
sly-u.5
for
101260516
sly-u.5
for
101252286
sot-r.1
for
102591372
sot-r.1
for
107062158
sot-r.1
for
102588896
nta-r.1
for
107787550
nta-r.1
for
107806459
nta-r.1
for
107781827
osa-u.5
for
4332365
zma-u.5
for
100275600
zma-u.5
for
100279315
tae-r.2
for
123092637
tae-r.2
for
123085398
tae-r.2
for
123097947
hvu-r.1
for
123449055
sbi-r.1
for
8085601
bdi-r.1
for
100840558


Ortholog ID: 5824
Species ath bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr mtr sly sly sot sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol AT5G05840 LOC103846924 LOC106419449 BNAC09G49650D LOC107951592 LOC107935415 LOC102617888 LOC100782214 LOC100783667 LOC100263234 LOC7490355 LOC7487995 LOC11415844 LOC11409666 LOC101260516 LOC101252286 LOC102591372 LOC107062158 LOC102588896 LOC107787550 LOC107780467 LOC107786059 LOC4332365 LOC100275600 LOC100279315 LOC123092637 LOC123085398 LOC123097947 LOC123449055 LOC8085601 LOC100840558
Function* replication factor C subunit, putative (DUF620) uncharacterized LOC103846924 uncharacterized LOC106419449 uncharacterized BNAC09G49650D uncharacterized LOC107951592 uncharacterized LOC107935415 uncharacterized LOC102617888 uncharacterized LOC100782214 uncharacterized LOC100783667 uncharacterized LOC100263234 uncharacterized LOC7490355 uncharacterized LOC7487995 uncharacterized LOC11415844 uncharacterized LOC11409666 uncharacterized LOC101260516 uncharacterized LOC101252286 uncharacterized LOC102591372 uncharacterized LOC107062158 uncharacterized LOC102588896 uncharacterized LOC107787550 uncharacterized LOC107780467 uncharacterized LOC107786059 uncharacterized LOC4332365 uncharacterized LOC100275600 uncharacterized LOC100279315 uncharacterized LOC123092637 uncharacterized LOC123085398 uncharacterized LOC123097947 uncharacterized LOC123449055 uncharacterized LOC8085601 uncharacterized LOC100840558
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00051 Fructose and mannose metabolism 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00940 Phenylpropanoid biosynthesis 7
vvi00941 Flavonoid biosynthesis 3
vvi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00051 Fructose and mannose metabolism 4
mtr00541 Biosynthesis of various nucleotide sugars 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01232 Nucleotide metabolism 6
nta00230 Purine metabolism 4
nta04820 Cytoskeleton in muscle cells 2
nta00240 Pyrimidine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 2
nta00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00062 Fatty acid elongation 2
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 3
sbi04626 Plant-pathogen interaction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830469 103846924 106419449 106432210 107951592 107935415 102617888 100782214 100783667 100263234 7490355 7487995 11415844 11409666 101260516 101252286 102591372 107062158 102588896 107787550 107780467 107786059 4332365 100275600 100279315 123092637 123085398 123097947 123449055 8085601 100840558
The preparation time of this page was 0.1 [sec].