ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	MYB43	myb domain protein 43
ath-u.5	MYB43	myb domain protein 43
ath-r.7	MYB43	myb domain protein 43
ath-e.2	MYB43	myb domain protein 43
ath-m.4.bio	MYB43	myb domain protein 43
ath-m.4.hor	MYB43	myb domain protein 43
ath-m.4.lig	MYB43	myb domain protein 43
ath-m.4.str	MYB43	myb domain protein 43
ath-m.4.tis	MYB43	myb domain protein 43
ath-u.5	MYB20	myb domain protein 20
bra-r.6	103831093	transcription factor MYB20
bra-r.6	103834260	protein ODORANT1-like
ghi-r.1	107890821	MYB-like transcription factor ODO1
ghi-r.1	107892095	MYB-like transcription factor ODO1
ghi-r.1	107892207	myb-related protein 315
cit-r.1	102624136	transcription factor MYB20
cit-r.1	102621734	MYB-like transcription factor ODO1
gma-u.5	100800360	MYB-like transcription factor ODO1
gma-u.5	100800494	transcription factor MYB32-like
gma-u.5	100803624	transcription factor MYB20
vvi-u.5	100259031	MYB-like transcription factor ODO1
vvi-u.5	100265304	transcription factor MYB20
ppo-u.5	7493562	transcription factor MYB20
ppo-u.5	7482990	MYB-like transcription factor ODO1
mtr-u.5	120576847	myb-related protein 315
mtr-u.5	11411244	transcription factor MYB20
mtr-u.5	11432588	transcription factor MYB20
sly-u.5	101268127	MYB-like transcription factor ODO1
sly-u.5	101268562	transcription factor MYB20-like
sly-u.5	101252939	transcription factor MYB20
sot-r.1	102586849	protein ODORANT1-like
sot-r.1	102593787	protein ODORANT1-like
sot-r.1	102579937	protein ODORANT1
nta-r.1	107778034	MYB-like transcription factor ODO1
nta-r.1	107779485	MYB-like transcription factor ODO1
osa-u.5	4346238	MYB-like transcription factor ODO1
osa-u.5	4347679	MYB-like transcription factor ODO1
osa-u.5	4330632	MYB-like transcription factor ODO1
zma-u.5	100383835	uncharacterized LOC100383835
tae-r.2	123121472	transcription factor MYB20
tae-r.2	123166220	transcription factor MYB20
tae-r.2	123150367	transcription factor MYB20
hvu-r.1	123399915	transcription factor MYB20-like
hvu-r.1	123402429	MYB-like transcription factor ODO1
sbi-r.1	8055800	protein ODORANT1
sbi-r.1	8058045	protein ODORANT1
sbi-r.1	8065753	protein ODORANT1
bdi-r.1	100830949	transcription factor MYB20
bdi-r.1	100826598	protein ODORANT1
bdi-r.1	100840827	protein ODORANT1

Top 50 coexpressed genes to MYB43 (ath-m.9 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to MYB43 (ath-m.9 coexpression data)

CoexMap"831522"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0009094 [list] [network] L-phenylalanine biosynthetic process	(7 genes)	IGI
GO:1901141 [list] [network] regulation of lignin biosynthetic process	(15 genes)	IGI
GO:2000762 [list] [network] regulation of phenylpropanoid metabolic process	(29 genes)	IGI
GO:2000652 [list] [network] regulation of secondary cell wall biogenesis	(34 genes)	IGI IMP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription	(262 genes)	IDA

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

IDA ISM

GO MF

GO:0003700 [list] [network] DNA-binding transcription factor activity

(1620 genes)

IDA ISS

Protein

NP_197163.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto 1

(predict for NP_197163.1)

Subcellular
localization
TargetP

other 9

(predict for NP_197163.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for MYB43	ath-u.5 for MYB43	ath-r.7 for MYB43	ath-e.2 for MYB43	ath-m.4.bio for MYB43	ath-m.4.hor for MYB43	ath-m.4.lig for MYB43	ath-m.4.str for MYB43	ath-m.4.tis for MYB43	ath-u.5 for MYB20	bra-r.6 for 103831093	bra-r.6 for 103834260	ghi-r.1 for 107890821	ghi-r.1 for 107892095	ghi-r.1 for 107892207	cit-r.1 for 102624136	cit-r.1 for 102621734	gma-u.5 for 100800360	gma-u.5 for 100800494	gma-u.5 for 100803624	vvi-u.5 for 100259031	vvi-u.5 for 100265304	ppo-u.5 for 7493562	ppo-u.5 for 7482990	mtr-u.5 for 120576847	mtr-u.5 for 11411244	mtr-u.5 for 11432588	sly-u.5 for 101268127	sly-u.5 for 101268562	sly-u.5 for 101252939	sot-r.1 for 102586849	sot-r.1 for 102593787	sot-r.1 for 102579937	nta-r.1 for 107778034	nta-r.1 for 107779485	osa-u.5 for 4346238	osa-u.5 for 4347679	osa-u.5 for 4330632	zma-u.5 for 100383835	tae-r.2 for 123121472	tae-r.2 for 123166220	tae-r.2 for 123150367	hvu-r.1 for 123399915	hvu-r.1 for 123402429	sbi-r.1 for 8055800	sbi-r.1 for 8058045	sbi-r.1 for 8065753	bdi-r.1 for 100830949	bdi-r.1 for 100826598	bdi-r.1 for 100840827

Ortholog

Ortholog ID: 438

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

MYB43

MYB20

Function^*

myb domain protein 43

myb domain protein 20

transcription factor MYB20

transcription factor MYB20-like

transcription factor MYB20