Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   SQE6   squalene monooxygenase 6 
 ath-u.5   SQE6   squalene monooxygenase 6 
 ath-r.7   SQE6   squalene monooxygenase 6 
 ath-e.2   SQE6   squalene monooxygenase 6 
 ath-m.4.bio   SQE6   squalene monooxygenase 6 
 ath-m.4.hor   SQE6   squalene monooxygenase 6 
 ath-m.4.lig   SQE6   squalene monooxygenase 6 
 ath-m.4.str   SQE6   squalene monooxygenase 6 
 ath-m.4.tis   SQE6   squalene monooxygenase 6 
 ath-u.5   SQP1   FAD/NAD(P)-binding oxidoreductase family protein 
 ath-u.5   AT5G24155   FAD/NAD(P)-binding oxidoreductase family protein 
 bra-r.6   103865842   squalene monooxygenase 1,1 
 bna-r.1   106366016   squalene monooxygenase 1,1 
 bna-r.1   106428446   squalene monooxygenase 1,1-like 

close


Top 50 coexpressed genes to SQE6 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to SQE6 (ath-m.9 coexpression data)

CoexMap"832482"


athSQE6 | Entrez gene ID : 832482      
Species ath bra bna vvi bdi ppo sbi gma ghi cit hvu sot sly nta osa tae zma cre mtr
Paralog 11 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00100 [list] [network] Steroid biosynthesis (36 genes)
ath00909 [list] [network] Sesquiterpenoid and triterpenoid biosynthesis (23 genes)
GO BP
GO:0016126 [list] [network] sterol biosynthetic process  (23 genes)  TAS  
GO CC
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_001330190.1 [sequence] [blastp]
NP_001330191.1 [sequence] [blastp]
NP_197804.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  E.R. 3,  chlo 1,  E.R._vacu 1  (predict for NP_001330190.1)
plas 6,  vacu 2,  cyto 1,  golg 1  (predict for NP_001330191.1)
plas 7,  vacu 2  (predict for NP_197804.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_001330190.1)
scret 9  (predict for NP_001330191.1)
scret 9  (predict for NP_197804.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
SQE6
ath-u.5
for
SQE6
ath-r.7
for
SQE6
ath-e.2
for
SQE6
ath-m.4.bio
for
SQE6
ath-m.4.hor
for
SQE6
ath-m.4.lig
for
SQE6
ath-m.4.str
for
SQE6
ath-m.4.tis
for
SQE6
ath-u.5
for
SQP1
ath-u.5
for
AT5G24155
bra-r.6
for
103865842
bna-r.1
for
106366016
bna-r.1
for
106428446


Ortholog ID: 19350
Species ath ath ath bra bna bna
Symbol SQE6 SQP1 AT5G24155 LOC103865842 LOC106366016 LOC106428446
Function* squalene monooxygenase 6 FAD/NAD(P)-binding oxidoreductase family protein FAD/NAD(P)-binding oxidoreductase family protein squalene monooxygenase 1,1 squalene monooxygenase 1,1 squalene monooxygenase 1,1-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
ath00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
ath00100 Steroid biosynthesis 2
ath00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00100 Steroid biosynthesis 2
ath00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00100 Steroid biosynthesis 2
ath00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00380 Tryptophan metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra04016 MAPK signaling pathway - plant 3
bra04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 6
bna00909 Sesquiterpenoid and triterpenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 6
bna00909 Sesquiterpenoid and triterpenoid biosynthesis 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832482 832480 832481 103865842 106366016 106428446
The preparation time of this page was 0.1 [sec].