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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   IAA28   indole-3-acetic acid inducible 28 
 ath-u.5   IAA28   indole-3-acetic acid inducible 28 
 ath-r.7   IAA28   indole-3-acetic acid inducible 28 
 ath-e.2   IAA28   indole-3-acetic acid inducible 28 
 ath-m.4.bio   IAA28   indole-3-acetic acid inducible 28 
 ath-m.4.hor   IAA28   indole-3-acetic acid inducible 28 
 ath-m.4.lig   IAA28   indole-3-acetic acid inducible 28 
 ath-m.4.str   IAA28   indole-3-acetic acid inducible 28 
 ath-m.4.tis   IAA28   indole-3-acetic acid inducible 28 
 bra-r.6   103837105   auxin-responsive protein IAA28 
 bna-r.1   106352114   auxin-responsive protein IAA28 
 bna-r.1   106352191   auxin-responsive protein IAA28 
 bna-r.1   106364021   auxin-responsive protein IAA28-like 

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Top 50 coexpressed genes to IAA28 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to IAA28 (ath-m.9 coexpression data)

CoexMap"832658"


athIAA28 | Entrez gene ID : 832658      
Species ath bra bna vvi bdi ppo sbi gma ghi cit hvu sot sly nta osa tae zma cre mtr
Paralog 9 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04075 [list] [network] Plant hormone signal transduction (433 genes)
GO BP
GO:0010102 [list] [network] lateral root morphogenesis  (80 genes)  IMP  
GO:0009733 [list] [network] response to auxin  (344 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0042802 [list] [network] identical protein binding  (414 genes)  IPI  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_568478.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  pero 2,  mito 1,  plas 1,  vacu 1,  mito_plas 1  (predict for NP_568478.1)
Subcellular
localization
TargetP
other 5,  chlo 5  (predict for NP_568478.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
IAA28
ath-u.5
for
IAA28
ath-r.7
for
IAA28
ath-e.2
for
IAA28
ath-m.4.bio
for
IAA28
ath-m.4.hor
for
IAA28
ath-m.4.lig
for
IAA28
ath-m.4.str
for
IAA28
ath-m.4.tis
for
IAA28
bra-r.6
for
103837105
bna-r.1
for
106352114
bna-r.1
for
106352191
bna-r.1
for
106364021


Ortholog ID: 18181
Species ath bra bna bna bna
Symbol IAA28 LOC103837105 LOC106352191 LOC106364021 LOC106444457
Function* indole-3-acetic acid inducible 28 auxin-responsive protein IAA28 auxin-responsive protein IAA28 auxin-responsive protein IAA28-like auxin-responsive protein IAA28
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 2
ath04075 Plant hormone signal transduction 2
ath00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832658 103837105 106352191 106364021 106444457
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