ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	AT5G28300	Duplicated homeodomain-like superfamily protein
ath-u.5	AT5G28300	Duplicated homeodomain-like superfamily protein
ath-r.7	AT5G28300	Duplicated homeodomain-like superfamily protein
ath-e.2	AT5G28300	Duplicated homeodomain-like superfamily protein
ath-m.4.bio	AT5G28300	Duplicated homeodomain-like superfamily protein
ath-m.4.hor	AT5G28300	Duplicated homeodomain-like superfamily protein
ath-m.4.lig	AT5G28300	Duplicated homeodomain-like superfamily protein
ath-m.4.str	AT5G28300	Duplicated homeodomain-like superfamily protein
ath-m.4.tis	AT5G28300	Duplicated homeodomain-like superfamily protein
bra-r.6	103874574	trihelix transcription factor GTL2
bra-r.6	103854639	trihelix transcription factor GTL2
bna-r.1	106382489	trihelix transcription factor GTL2
bna-r.1	106367775	trihelix transcription factor GTL2
bna-r.1	106348639	trihelix transcription factor GTL2
ghi-r.1	107926820	trihelix transcription factor GTL2
ghi-r.1	107888971	trihelix transcription factor GTL2
cit-r.1	102612135	trihelix transcription factor GTL2
gma-u.5	100801868	trihelix transcription factor GTL2
gma-u.5	100804367	trihelix transcription factor GTL2-like
gma-u.5	GT-2B	trihelix transcription factor
vvi-u.5	100255432	trihelix transcription factor GTL2
ppo-u.5	7474599	trihelix transcription factor GTL2
ppo-u.5	18098953	trihelix transcription factor GTL2
mtr-u.5	11410023	trihelix transcription factor GTL2

Annotation

functional annotation

KEGG

GO BP

GO:0045893 [list] [network] positive regulation of DNA-templated transcription	(262 genes)	IDA
GO:0006355 [list] [network] regulation of DNA-templated transcription	(1618 genes)	TAS

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

IDA ISM

GO MF

GO:0000987 [list] [network] cis-regulatory region sequence-specific DNA binding	(55 genes)	IDA
GO:0005516 [list] [network] calmodulin binding	(128 genes)	IDA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1620 genes)	ISS

Protein

NP_568506.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for NP_568506.2)

Subcellular
localization
TargetP

chlo 7, other 3

(predict for NP_568506.2)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AT5G28300	ath-u.5 for AT5G28300	ath-r.7 for AT5G28300	ath-e.2 for AT5G28300	ath-m.4.bio for AT5G28300	ath-m.4.hor for AT5G28300	ath-m.4.lig for AT5G28300	ath-m.4.str for AT5G28300	ath-m.4.tis for AT5G28300	bra-r.6 for 103874574	bra-r.6 for 103854639	bna-r.1 for 106382489	bna-r.1 for 106367775	bna-r.1 for 106348639	ghi-r.1 for 107926820	ghi-r.1 for 107888971	cit-r.1 for 102612135	gma-u.5 for 100801868	gma-u.5 for 100804367	gma-u.5 for GT-2B	vvi-u.5 for 100255432	ppo-u.5 for 7474599	ppo-u.5 for 18098953	mtr-u.5 for 11410023