ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	AT5G39430	DUF1336 family protein, putative (DUF1336)
ath-m.4.bio	AT5G39430	DUF1336 family protein, putative (DUF1336)
ath-m.4.hor	AT5G39430	DUF1336 family protein, putative (DUF1336)
ath-m.4.lig	AT5G39430	DUF1336 family protein, putative (DUF1336)
ath-m.4.str	AT5G39430	DUF1336 family protein, putative (DUF1336)
ath-m.4.tis	AT5G39430	DUF1336 family protein, putative (DUF1336)
ath-u.5	AT3G29180	DUF1336 family protein (DUF1336)
ath-u.5	AT1G10410	CW14 protein (DUF1336)
ath-u.5	AT1G13970	beta-hexosaminidase (DUF1336)
bra-r.6	103843303	uncharacterized LOC103843303
bra-r.6	103843013	uncharacterized LOC103843013
bra-r.6	103871811	uncharacterized LOC103871811
bna-r.1	106434962	uncharacterized LOC106434962
bna-r.1	BNAA09G48200D	uncharacterized BNAA09G48200D
ghi-r.1	107911790	uncharacterized LOC107911790
ghi-r.1	107903862	uncharacterized LOC107903862
ghi-r.1	107899605	uncharacterized LOC107899605
cit-r.1	102624792	uncharacterized LOC102624792
cit-r.1	102623853	uncharacterized LOC102623853
cit-r.1	102612181	hypothetical protein
gma-u.5	100808949	uncharacterized LOC100808949
gma-u.5	100807449	uncharacterized LOC100807449
gma-u.5	100804224	uncharacterized LOC100804224
vvi-u.5	100245770	uncharacterized LOC100245770
vvi-u.5	100260447	uncharacterized LOC100260447
vvi-u.5	100266380	uncharacterized LOC100266380
ppo-u.5	7492909	uncharacterized LOC7492909
ppo-u.5	7492405	uncharacterized LOC7492405
ppo-u.5	7473228	uncharacterized LOC7473228
mtr-u.5	11416326	uncharacterized LOC11416326
mtr-u.5	11412917	uncharacterized LOC11412917
mtr-u.5	11418076	uncharacterized LOC11418076
sly-u.5	101247394	uncharacterized LOC101247394
sly-u.5	101249264	uncharacterized LOC101249264
sly-u.5	101251556	uncharacterized LOC101251556
sot-r.1	102605449	uncharacterized LOC102605449
sot-r.1	102581532	uncharacterized LOC102581532
nta-r.1	107784721	uncharacterized LOC107784721
nta-r.1	107770021	uncharacterized LOC107770021
nta-r.1	107790534	protein ENHANCED DISEASE RESISTANCE 2
osa-u.5	4352619	uncharacterized LOC4352619
osa-u.5	4333788	uncharacterized LOC4333788
zma-u.5	100274268	DUF1336 domain containing protein expressed
zma-u.5	103643836	uncharacterized LOC103643836
tae-r.2	123095755	uncharacterized LOC123095755
tae-r.2	123122908	uncharacterized LOC123122908
tae-r.2	123119652	uncharacterized LOC123119652
hvu-r.1	123452332	uncharacterized LOC123452332
hvu-r.1	123447240	uncharacterized LOC123447240
sbi-r.1	8068130	uncharacterized LOC8068130
sbi-r.1	8054140	uncharacterized LOC8054140
bdi-r.1	100831685	uncharacterized LOC100831685
bdi-r.1	100826717	uncharacterized LOC100826717
cre-r.1	CHLRE_13g571800v5	uncharacterized protein

Top 50 coexpressed genes to AT5G39430 (ath-m.9 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT5G39430 (ath-m.9 coexpression data)

CoexMap"833939"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005739 [list] [network] mitochondrion

(4244 genes)

ISM

GO MF

Protein

NP_198759.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, mito 3, cyto_mito 2, nucl_plas 2

(predict for NP_198759.1)

Subcellular
localization
TargetP

mito 6

(predict for NP_198759.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AT5G39430	ath-m.4.bio for AT5G39430	ath-m.4.hor for AT5G39430	ath-m.4.lig for AT5G39430	ath-m.4.str for AT5G39430	ath-m.4.tis for AT5G39430	ath-u.5 for AT3G29180	ath-u.5 for AT1G10410	ath-u.5 for AT1G13970	bra-r.6 for 103843303	bra-r.6 for 103843013	bra-r.6 for 103871811	bna-r.1 for 106434962	bna-r.1 for BNAA09G48200D	ghi-r.1 for 107911790	ghi-r.1 for 107903862	ghi-r.1 for 107899605	cit-r.1 for 102624792	cit-r.1 for 102623853	cit-r.1 for 102612181	gma-u.5 for 100808949	gma-u.5 for 100807449	gma-u.5 for 100804224	vvi-u.5 for 100245770	vvi-u.5 for 100260447	vvi-u.5 for 100266380	ppo-u.5 for 7492909	ppo-u.5 for 7492405	ppo-u.5 for 7473228	mtr-u.5 for 11416326	mtr-u.5 for 11412917	mtr-u.5 for 11418076	sly-u.5 for 101247394	sly-u.5 for 101249264	sly-u.5 for 101251556	sot-r.1 for 102605449	sot-r.1 for 102581532	nta-r.1 for 107784721	nta-r.1 for 107770021	nta-r.1 for 107790534	osa-u.5 for 4352619	osa-u.5 for 4333788	zma-u.5 for 100274268	zma-u.5 for 103643836	tae-r.2 for 123095755	tae-r.2 for 123122908	tae-r.2 for 123119652	hvu-r.1 for 123452332	hvu-r.1 for 123447240	sbi-r.1 for 8068130	sbi-r.1 for 8054140	bdi-r.1 for 100831685	bdi-r.1 for 100826717	cre-r.1 for CHLRE_13g571800v5

Ortholog

Ortholog ID: 505

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

CW14

Function^*

DUF1336 family protein (DUF1336)

beta-hexosaminidase (DUF1336)

CW14 protein (DUF1336)

uncharacterized LOC103871811

uncharacterized LOC103875104

uncharacterized BNAA06G08900D

uncharacterized BNAC03G48270D

uncharacterized LOC106346531

uncharacterized LOC107922708

uncharacterized LOC107924303

uncharacterized LOC102624792

uncharacterized LOC102623853

uncharacterized LOC102625365

uncharacterized LOC100807449

uncharacterized LOC100798811

uncharacterized LOC100788001

uncharacterized LOC100245770

uncharacterized LOC100260447

uncharacterized LOC100266380

uncharacterized LOC7492909

uncharacterized LOC7492405

uncharacterized LOC7495995

uncharacterized LOC11416326

uncharacterized LOC11412917

uncharacterized LOC11425332

uncharacterized LOC101247394

uncharacterized LOC101246299

uncharacterized LOC101262766

uncharacterized LOC102581532

uncharacterized LOC102599526

uncharacterized LOC102605832

uncharacterized LOC107784721

uncharacterized LOC107767408

uncharacterized LOC107774802

uncharacterized LOC4352619

uncharacterized LOC4334179

DUF1336 domain containing protein expressed

uncharacterized LOC123119652

uncharacterized LOC123090741

uncharacterized LOC123452332

uncharacterized LOC123395727

uncharacterized LOC8068130

uncharacterized LOC8054140

uncharacterized LOC8086210

uncharacterized LOC100831685

uncharacterized LOC100826717

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	3
ath04712	Circadian rhythm - plant	3
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03083	Polycomb repressive complex	3
bra04120	Ubiquitin mediated proteolysis	3
bra04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	3
bra00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01250	Biosynthesis of nucleotide sugars	2
cit00061	Fatty acid biosynthesis	2
cit01212	Fatty acid metabolism	2
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00280	Valine, leucine and isoleucine degradation	2
cit00640	Propanoate metabolism	2
cit00564	Glycerophospholipid metabolism	2
cit00565	Ether lipid metabolism	2
cit00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01230	Biosynthesis of amino acids	9
vvi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	8
vvi00940	Phenylpropanoid biosynthesis	2
vvi01200	Carbon metabolism	2
vvi00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	4
ppo04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	3
mtr04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03083	Polycomb repressive complex	2
mtr04120	Ubiquitin mediated proteolysis	2
mtr04141	Protein processing in endoplasmic reticulum	2
mtr04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	2
sot00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	3
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00561	Glycerolipid metabolism	2
nta00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00900	Terpenoid backbone biosynthesis	4
osa01240	Biosynthesis of cofactors	3
osa00790	Folate biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03015	mRNA surveillance pathway	2
osa04382	Cornified envelope formation	2
osa04148	Efferocytosis	2
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	3
tae00565	Ether lipid metabolism	3
tae04144	Endocytosis	3
tae00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00561	Glycerolipid metabolism	3
tae00564	Glycerophospholipid metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae00061	Fatty acid biosynthesis	2
tae00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	5
bdi04141	Protein processing in endoplasmic reticulum	3

Expression

Expression pattern

Entrez Gene ID^*

822569

837957

842255

103871811

103875104

106346540

106346527

106346531

107922708

107924303

102624792

102623853

102625365

100807449

100798811

100788001

100245770

100260447

100266380

7492909

7492405

7495995

11416326

11412917

11425332

101247394

101246299

101262766

102581532

102599526

102605832

107784721

107767408

107774802

4352619

4334179

100274268

123119652

123090741

123452332

123395727

8068130

8054140

8086210

100831685

100826717

66055947

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Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	9	3	2	3	3	3	3	3	3	3	2	3	2	2	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT5G39430 (ath-m.9 coexpression data)

Top 50 enrichment test to AT5G39430 (ath-m.9 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**