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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G41560   DET1 complexing ubiquitin ligase 
 ath-u.5   AT5G41560   DET1 complexing ubiquitin ligase 
 ath-r.7   AT5G41560   DET1 complexing ubiquitin ligase 
 ath-e.2   AT5G41560   DET1 complexing ubiquitin ligase 
 ath-m.4.bio   AT5G41560   DET1 complexing ubiquitin ligase 
 ath-m.4.hor   AT5G41560   DET1 complexing ubiquitin ligase 
 ath-m.4.lig   AT5G41560   DET1 complexing ubiquitin ligase 
 ath-m.4.str   AT5G41560   DET1 complexing ubiquitin ligase 
 ath-m.4.tis   AT5G41560   DET1 complexing ubiquitin ligase 
 bra-r.6   103864090   DET1- and DDB1-associated protein 1 
 bna-r.1   106446270   DET1- and DDB1-associated protein 1 
 ghi-r.1   121220090   DET1- and DDB1-associated protein 1 
 ghi-r.1   121215455   DET1- and DDB1-associated protein 1 
 ghi-r.1   107952124   DET1- and DDB1-associated protein 1 
 cit-r.1   102613857   hypothetical protein 
 gma-u.5   100784555   DET1- and DDB1-associated protein 1 
 gma-u.5   100527830   DDB1-ASSOCIATED1-like protein 
 vvi-u.5   100241601   DET1- and DDB1-associated protein 1 
 ppo-u.5   7472743   DET1- and DDB1-associated protein 1 
 mtr-u.5   11415365   DET1- and DDB1-associated protein 1 
 sot-r.1   102591569   uncharacterized LOC102591569 
 nta-r.1   107778432   DET1- and DDB1-associated protein 1-like 
 nta-r.1   107772013   DET1- and DDB1-associated protein 1-like 
 osa-u.5   4331465   DET1- and DDB1-associated protein 1 
 zma-u.5   100276556   Det1 complexing ubiquitin ligase 
 tae-r.2   123093538   DET1- and DDB1-associated protein 1 
 tae-r.2   123098810   DET1- and DDB1-associated protein 1 
 tae-r.2   123105777   DET1- and DDB1-associated protein 1 
 hvu-r.1   123449822   DET1- and DDB1-associated protein 1 
 sbi-r.1   8085714   uncharacterized LOC8085714 
 bdi-r.1   100835977   uncharacterized LOC100835977 

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Top 50 coexpressed genes to AT5G41560 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G41560 (ath-m.9 coexpression data)

CoexMap"834158"


athAT5G41560 | Entrez gene ID : 834158      
Species ath bra bna ghi cit gma vvi ppo mtr sot nta osa zma tae hvu sbi bdi cre sly
Paralog 9 1 1 3 1 2 1 1 1 1 2 1 1 3 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032436 [list] [network] positive regulation of proteasomal ubiquitin-dependent protein catabolic process  (3 genes)  IMP  
GO:0009788 [list] [network] negative regulation of abscisic acid-activated signaling pathway  (62 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IPI ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001330332.1 [sequence] [blastp]
NP_198971.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  chlo 3,  mito 3,  chlo_mito 3  (predict for NP_001330332.1)
nucl 9  (predict for NP_198971.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for NP_001330332.1)
chlo 8,  other 3  (predict for NP_198971.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G41560
ath-u.5
for
AT5G41560
ath-r.7
for
AT5G41560
ath-e.2
for
AT5G41560
ath-m.4.bio
for
AT5G41560
ath-m.4.hor
for
AT5G41560
ath-m.4.lig
for
AT5G41560
ath-m.4.str
for
AT5G41560
ath-m.4.tis
for
AT5G41560
bra-r.6
for
103864090
bna-r.1
for
106446270
ghi-r.1
for
121220090
ghi-r.1
for
121215455
ghi-r.1
for
107952124
cit-r.1
for
102613857
gma-u.5
for
100784555
gma-u.5
for
100527830
vvi-u.5
for
100241601
ppo-u.5
for
7472743
mtr-u.5
for
11415365
sot-r.1
for
102591569
nta-r.1
for
107778432
nta-r.1
for
107772013
osa-u.5
for
4331465
zma-u.5
for
100276556
tae-r.2
for
123093538
tae-r.2
for
123098810
tae-r.2
for
123105777
hvu-r.1
for
123449822
sbi-r.1
for
8085714
bdi-r.1
for
100835977


Ortholog ID: 8175
Species ath bra bna ghi ghi ghi cit gma gma vvi ppo mtr sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT5G41560 LOC103864090 LOC106446270 LOC121215455 LOC107947508 LOC107947062 LOC102613857 LOC100784555 LOC100527830 LOC100241601 LOC7472743 LOC11415365 LOC102591569 LOC107778432 LOC107772013 LOC4331465 LOC100276556 LOC123093538 LOC123098810 LOC123105777 LOC123449822 LOC8085714 LOC100835977
Function* DET1 complexing ubiquitin ligase DET1- and DDB1-associated protein 1 DET1- and DDB1-associated protein 1 DET1- and DDB1-associated protein 1 DET1- and DDB1-associated protein 1 DET1- and DDB1-associated protein 1 hypothetical protein DET1- and DDB1-associated protein 1 DDB1-ASSOCIATED1-like protein DET1- and DDB1-associated protein 1 DET1- and DDB1-associated protein 1 DET1- and DDB1-associated protein 1 uncharacterized LOC102591569 DET1- and DDB1-associated protein 1-like DET1- and DDB1-associated protein 1-like DET1- and DDB1-associated protein 1 Det1 complexing ubiquitin ligase DET1- and DDB1-associated protein 1 DET1- and DDB1-associated protein 1 DET1- and DDB1-associated protein 1 DET1- and DDB1-associated protein 1 uncharacterized LOC8085714 uncharacterized LOC100835977
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 3
ath04145 Phagosome 3
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
bna04145 Phagosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
ghi00941 Flavonoid biosynthesis 2
ghi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 4
gma00010 Glycolysis / Gluconeogenesis 3
gma01200 Carbon metabolism 3
gma00620 Pyruvate metabolism 2
gma00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 7
vvi03040 Spliceosome 3
vvi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
mtr04120 Ubiquitin mediated proteolysis 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03083 Polycomb repressive complex 2
sot04120 Ubiquitin mediated proteolysis 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae04120 Ubiquitin mediated proteolysis 3
tae00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00541 Biosynthesis of various nucleotide sugars 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03020 RNA polymerase 3
sbi03420 Nucleotide excision repair 3
sbi04146 Peroxisome 3
sbi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834158 103864090 106446270 121215455 107947508 107947062 102613857 100784555 100527830 100241601 7472743 11415365 102591569 107778432 107772013 4331465 100276556 123093538 123098810 123105777 123449822 8085714 100835977
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