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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   DCI1   delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 
 ath-u.5   DCI1   delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 
 ath-r.7   DCI1   delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 
 ath-e.2   DCI1   delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 
 ath-m.4.bio   DCI1   delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 
 ath-m.4.hor   DCI1   delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 
 ath-m.4.lig   DCI1   delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 
 ath-m.4.str   DCI1   delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 
 ath-m.4.tis   DCI1   delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 
 gma-u.5   100804855   delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like 
 vvi-u.5   100249010   delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal 
 ppo-u.5   7460573   delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal 
 mtr-u.5   11418463   delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal 
 sly-u.5   101255297   delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal 
 osa-u.5   4327232   delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal 
 zma-u.5   103655617   delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal-like 
 zma-u.5   100192936   delta3,5-delta2,4-dienoyl-CoA isomerase 

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Top 50 coexpressed genes to DCI1 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to DCI1 (ath-m.9 coexpression data)

CoexMap"834346"


athDCI1 | Entrez gene ID : 834346      
Species ath gma vvi ppo mtr sly osa zma nta bna tae bdi sot bra sbi hvu cit cre ghi
Paralog 9 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04146 [list] [network] Peroxisome (90 genes)
GO BP
GO:0006635 [list] [network] fatty acid beta-oxidation  (24 genes)  IDA  
GO:0009062 [list] [network] fatty acid catabolic process  (30 genes)  TAS  
GO CC
GO:0005777 [list] [network] peroxisome  (313 genes)  HDA IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0051750 [list] [network] delta(3,5)-delta(2,4)-dienoyl-CoA isomerase activity  (1 genes)  IDA IGI  
Protein NP_001078698.1 [sequence] [blastp]
NP_199142.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 2,  plas 1,  cysk_nucl 1  (predict for NP_001078698.1)
nucl 5,  plas 2,  chlo 1,  cyto 1  (predict for NP_199142.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001078698.1)
other 9  (predict for NP_199142.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
DCI1

.
ath-u.5
for
DCI1

.
ath-r.7
for
DCI1

.
ath-e.2
for
DCI1

.
ath-m.4.bio
for
DCI1

.
ath-m.4.hor
for
DCI1

.
ath-m.4.lig
for
DCI1

.
ath-m.4.str
for
DCI1

.
ath-m.4.tis
for
DCI1

.
gma-u.5
for
100804855

.
vvi-u.5
for
100249010

.
ppo-u.5
for
7460573

.
mtr-u.5
for
11418463

.
sly-u.5
for
101255297

.
osa-u.5
for
4327232

.
zma-u.5
for
103655617

.
zma-u.5
for
100192936

.


Ortholog ID: 9716
Species ath gma sly osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta
Symbol DCI1 LOC100804855 LOC101255297 LOC4327232 LOC100192936 LOC103655617 LOC103839250 LOC100249010 LOC7460573 LOC11418463 LOC123072066 LOC123063160 LOC123445285 LOC107912942 LOC107919096 LOC106447057 LOC106437370 CHLRE_10g463150v5 LOC8059382 LOC102601569 LOC102611221 LOC100829779 LOC107783788
Function* delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal delta3,5-delta2,4-dienoyl-CoA isomerase delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal-like delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal uncharacterized protein delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00071 Fatty acid degradation 5
ath01212 Fatty acid metabolism 4
ath00280 Valine, leucine and isoleucine degradation 3
ath00592 alpha-Linolenic acid metabolism 3
ath00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04146 Peroxisome 3
zma01200 Carbon metabolism 3
zma00020 Citrate cycle (TCA cycle) 2
zma00270 Cysteine and methionine metabolism 2
zma00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04146 Peroxisome 3
zma00562 Inositol phosphate metabolism 2
zma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
bra01200 Carbon metabolism 2
bra00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo00190 Oxidative phosphorylation 2
ppo04142 Lysosome 2
ppo04145 Phagosome 2
ppo00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 5
mtr00020 Citrate cycle (TCA cycle) 4
mtr01200 Carbon metabolism 4
mtr00785 Lipoic acid metabolism 3
mtr01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 5
tae00730 Thiamine metabolism 2
tae00740 Riboflavin metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
hvu04146 Peroxisome 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 2
ghi03060 Protein export 2
ghi03040 Spliceosome 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 3
bna00071 Fatty acid degradation 2
bna00280 Valine, leucine and isoleucine degradation 2
bna00310 Lysine degradation 2
bna00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 3
bna00071 Fatty acid degradation 2
bna00280 Valine, leucine and isoleucine degradation 2
bna00310 Lysine degradation 2
bna00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 6
cre04146 Peroxisome 4
cre00071 Fatty acid degradation 3
cre01212 Fatty acid metabolism 3
cre00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot01210 2-Oxocarboxylic acid metabolism 2
sot01230 Biosynthesis of amino acids 2
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 5
cit04142 Lysosome 3
cit04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834346 100804855 101255297 4327232 100192936 103655617 103839250 100249010 7460573 11418463 123072066 123063160 123445285 107912942 107919096 106447057 106437370 5723984 8059382 102601569 102611221 100829779 107783788
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