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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   MCM3   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-u.5   MCM3   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-r.7   MCM3   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-e.2   MCM3   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.bio   MCM3   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.hor   MCM3   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.lig   MCM3   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.str   MCM3   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.tis   MCM3   Minichromosome maintenance (MCM2/3/5) family protein 
 bra-r.6   103853694   DNA replication licensing factor MCM3 
 bra-r.6   103827741   DNA replication licensing factor MCM3 
 bna-r.1   106411275   DNA replication licensing factor MCM3 
 bna-r.1   106381769   DNA replication licensing factor MCM3 
 bna-r.1   106402299   DNA replication licensing factor MCM3 
 ghi-r.1   107905873   DNA replication licensing factor MCM3 
 ghi-r.1   107942638   DNA replication licensing factor MCM3 
 ghi-r.1   107935920   DNA replication licensing factor MCM3 
 cit-r.1   102621522   DNA replication licensing factor MCM3 
 gma-u.5   100811545   DNA replication licensing factor MCM3 
 gma-u.5   100791302   DNA replication licensing factor MCM3 homolog 2 
 vvi-u.5   100253704   DNA replication licensing factor MCM3 homolog 2 
 ppo-u.5   7472571   DNA replication licensing factor MCM3 
 mtr-u.5   11407765   DNA replication licensing factor MCM3 
 sly-u.5   101268250   DNA replication licensing factor MCM3 homolog 2 
 sot-r.1   102588993   DNA replication licensing factor MCM3 homolog 2 
 nta-r.1   107805042   DNA replication licensing factor MCM3 homolog 2 
 nta-r.1   107784237   DNA replication licensing factor MCM3 homolog 2 
 osa-u.5   4339099   DNA replication licensing factor MCM3-like 
 zma-u.5   542738   replication origin activator 2 
 zma-u.5   100193296   putative mini-chromosome maintenance (MCM) complex protein family 
 tae-r.2   123182365   DNA replication licensing factor MCM3 
 tae-r.2   123136958   DNA replication licensing factor MCM3 
 tae-r.2   123060052   DNA replication licensing factor MCM3 
 hvu-r.1   123444757   DNA replication licensing factor MCM3 homolog 3 
 sbi-r.1   8076996   DNA replication licensing factor MCM3 homolog 3 
 bdi-r.1   100823461   DNA replication licensing factor MCM3 homolog 2 
 cre-r.1   CHLRE_06g295700v5   uncharacterized protein 

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Top 50 coexpressed genes to MCM3 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MCM3 (ath-m.9 coexpression data)

CoexMap"834670"


athMCM3 | Entrez gene ID : 834670      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 1 2 1 1 1 1 1 2 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03030 [list] [network] DNA replication (43 genes)
GO BP
GO CC
GO:0000347 [list] [network] THO complex  (14 genes)  IDA  
GO:0000785 [list] [network] chromatin  (140 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001332359.1 [sequence] [blastp]
NP_001332360.1 [sequence] [blastp]
NP_001332361.1 [sequence] [blastp]
NP_199440.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_001332359.1)
cyto 6,  nucl 2,  pero 1,  nucl_plas 1  (predict for NP_001332360.1)
cyto 6,  nucl 2,  plas 1  (predict for NP_001332361.1)
cyto 6,  nucl 2,  plas 1,  pero 1,  cysk 1,  cysk_plas 1  (predict for NP_199440.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001332359.1)
other 8  (predict for NP_001332360.1)
other 8  (predict for NP_001332361.1)
other 8  (predict for NP_199440.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
MCM3
ath-u.5
for
MCM3
ath-r.7
for
MCM3
ath-e.2
for
MCM3
ath-m.4.bio
for
MCM3
ath-m.4.hor
for
MCM3
ath-m.4.lig
for
MCM3
ath-m.4.str
for
MCM3
ath-m.4.tis
for
MCM3
bra-r.6
for
103853694
bra-r.6
for
103827741
bna-r.1
for
106411275
bna-r.1
for
106381769
bna-r.1
for
106402299
ghi-r.1
for
107905873
ghi-r.1
for
107942638
ghi-r.1
for
107935920
cit-r.1
for
102621522
gma-u.5
for
100811545
gma-u.5
for
100791302
vvi-u.5
for
100253704
ppo-u.5
for
7472571
mtr-u.5
for
11407765
sly-u.5
for
101268250
sot-r.1
for
102588993
nta-r.1
for
107805042
nta-r.1
for
107784237
osa-u.5
for
4339099
zma-u.5
for
542738
zma-u.5
for
100193296
tae-r.2
for
123182365
tae-r.2
for
123136958
tae-r.2
for
123060052
hvu-r.1
for
123444757
sbi-r.1
for
8076996
bdi-r.1
for
100823461
cre-r.1
for
CHLRE_06g295700v5


Ortholog ID: 7366
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol MCM3 LOC103853694 LOC103827741 LOC106411275 LOC106381769 LOC106407159 LOC107905873 LOC107935920 LOC107913776 LOC102621522 LOC100811545 LOC100791302 LOC100253704 LOC7472571 LOC11407765 LOC101268250 LOC102588993 LOC107805042 LOC107784237 LOC4339099 LOC542738 LOC100193296 LOC123182365 LOC123136958 LOC123060052 LOC123444757 LOC8076996 LOC100823461 CHLRE_06g295700v5
Function* Minichromosome maintenance (MCM2/3/5) family protein DNA replication licensing factor MCM3 DNA replication licensing factor MCM3 DNA replication licensing factor MCM3 DNA replication licensing factor MCM3 DNA replication licensing factor MCM3-like DNA replication licensing factor MCM3 DNA replication licensing factor MCM3 DNA replication licensing factor MCM3 DNA replication licensing factor MCM3 DNA replication licensing factor MCM3 DNA replication licensing factor MCM3 homolog 2 DNA replication licensing factor MCM3 homolog 2 DNA replication licensing factor MCM3 DNA replication licensing factor MCM3 DNA replication licensing factor MCM3 homolog 2 DNA replication licensing factor MCM3 homolog 2 DNA replication licensing factor MCM3 homolog 2 DNA replication licensing factor MCM3 homolog 2 DNA replication licensing factor MCM3-like replication origin activator 2 putative mini-chromosome maintenance (MCM) complex protein family DNA replication licensing factor MCM3 DNA replication licensing factor MCM3 DNA replication licensing factor MCM3 DNA replication licensing factor MCM3 homolog 3 DNA replication licensing factor MCM3 homolog 3 DNA replication licensing factor MCM3 homolog 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 10
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 10
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
bra03420 Nucleotide excision repair 2
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 9
bra03420 Nucleotide excision repair 2
bra03430 Mismatch repair 2
bra03440 Homologous recombination 2
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 9
bna03430 Mismatch repair 7
bna03410 Base excision repair 4
bna03420 Nucleotide excision repair 4
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 11
bna03410 Base excision repair 6
bna03420 Nucleotide excision repair 6
bna03430 Mismatch repair 6
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 11
bna03410 Base excision repair 6
bna03420 Nucleotide excision repair 6
bna03430 Mismatch repair 6
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 11
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 11
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 7
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 13
ppo03420 Nucleotide excision repair 4
ppo03410 Base excision repair 3
ppo03440 Homologous recombination 2
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 7
mtr03440 Homologous recombination 2
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 11
sly03420 Nucleotide excision repair 3
sly03430 Mismatch repair 3
sly03440 Homologous recombination 2
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 8
sot03430 Mismatch repair 2
sot00240 Pyrimidine metabolism 2
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 15
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 17
nta03420 Nucleotide excision repair 3
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 12
osa03420 Nucleotide excision repair 3
osa03430 Mismatch repair 2
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 9
zma03420 Nucleotide excision repair 3
zma03430 Mismatch repair 3
zma03440 Homologous recombination 2
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 12
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 15
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 16
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 10
tae03082 ATP-dependent chromatin remodeling 3
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 7
sbi03460 Fanconi anemia pathway 2
sbi03440 Homologous recombination 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 8
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834670 103853694 103827741 106411275 106381769 106407159 107905873 107935920 107913776 102621522 100811545 100791302 100253704 7472571 11407765 101268250 102588993 107805042 107784237 4339099 542738 100193296 123182365 123136958 123060052 123444757 8076996 100823461 5717065
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