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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   UBP21   ubiquitin-specific protease 21 
 ath-u.5   UBP21   ubiquitin-specific protease 21 
 ath-r.7   UBP21   ubiquitin-specific protease 21 
 ath-e.2   UBP21   ubiquitin-specific protease 21 
 ath-m.4.bio   UBP21   ubiquitin-specific protease 21 
 ath-m.4.hor   UBP21   ubiquitin-specific protease 21 
 ath-m.4.lig   UBP21   ubiquitin-specific protease 21 
 ath-m.4.str   UBP21   ubiquitin-specific protease 21 
 ath-m.4.tis   UBP21   ubiquitin-specific protease 21 
 ath-u.5   UBP20   ubiquitin-specific protease 20 
 bra-r.6   103860952   ubiquitin carboxyl-terminal hydrolase 20 
 bra-r.6   103827712   ubiquitin carboxyl-terminal hydrolase 21 
 bna-r.1   106440210   ubiquitin carboxyl-terminal hydrolase 20 
 bna-r.1   106411236   ubiquitin carboxyl-terminal hydrolase 21 
 ghi-r.1   107912181   ubiquitin carboxyl-terminal hydrolase 20 
 ghi-r.1   107924804   ubiquitin carboxyl-terminal hydrolase 20 
 ghi-r.1   107939754   ubiquitin carboxyl-terminal hydrolase 20 
 cit-r.1   102625507   ubiquitin carboxyl-terminal hydrolase 21 
 gma-u.5   100806936   ubiquitin carboxyl-terminal hydrolase 20 
 gma-u.5   100808015   ubiquitin carboxyl-terminal hydrolase 20 
 vvi-u.5   104882327   ubiquitin carboxyl-terminal hydrolase 21 
 ppo-u.5   18096977   ubiquitin carboxyl-terminal hydrolase 24 
 sly-u.5   101244309   ubiquitin carboxyl-terminal hydrolase 20 
 nta-r.1   107826307   ubiquitin carboxyl-terminal hydrolase 21 
 nta-r.1   107814694   ubiquitin carboxyl-terminal hydrolase 20 
 nta-r.1   107771185   uncharacterized LOC107771185 
 osa-u.5   4330388   ubiquitin carboxyl-terminal hydrolase 21 
 zma-u.5   103653937   ubiquitin carboxyl-terminal hydrolase 21 
 zma-u.5   103627580   ubiquitin carboxyl-terminal hydrolase 21 
 tae-r.2   123137837   ubiquitin carboxyl-terminal hydrolase 21 
 tae-r.2   123128054   ubiquitin carboxyl-terminal hydrolase 21 
 tae-r.2   123145148   ubiquitin carboxyl-terminal hydrolase 21 
 hvu-r.1   123403787   ubiquitin carboxyl-terminal hydrolase 21-like 
 sbi-r.1   8073183   ubiquitin carboxyl-terminal hydrolase 20 
 bdi-r.1   100831961   ubiquitin carboxyl-terminal hydrolase 21 

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Top 50 coexpressed genes to UBP21 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to UBP21 (ath-m.9 coexpression data)

CoexMap"834717"


athUBP21 | Entrez gene ID : 834717      
Species ath bra bna ghi cit gma vvi ppo sly nta osa zma tae hvu sbi bdi sot mtr cre
Paralog 10 2 2 3 1 2 1 1 1 3 1 2 3 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006281 [list] [network] DNA repair  (203 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001330462.1 [sequence] [blastp]
NP_568667.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001330462.1)
nucl 10  (predict for NP_568667.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_001330462.1)
chlo 9,  other 3  (predict for NP_568667.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
UBP21
ath-u.5
for
UBP21
ath-r.7
for
UBP21
ath-e.2
for
UBP21
ath-m.4.bio
for
UBP21
ath-m.4.hor
for
UBP21
ath-m.4.lig
for
UBP21
ath-m.4.str
for
UBP21
ath-m.4.tis
for
UBP21
ath-u.5
for
UBP20
bra-r.6
for
103860952
bra-r.6
for
103827712
bna-r.1
for
106440210
bna-r.1
for
106411236
ghi-r.1
for
107912181
ghi-r.1
for
107924804
ghi-r.1
for
107939754
cit-r.1
for
102625507
gma-u.5
for
100806936
gma-u.5
for
100808015
vvi-u.5
for
104882327
ppo-u.5
for
18096977
sly-u.5
for
101244309
nta-r.1
for
107826307
nta-r.1
for
107814694
nta-r.1
for
107771185
osa-u.5
for
4330388
zma-u.5
for
103653937
zma-u.5
for
103627580
tae-r.2
for
123137837
tae-r.2
for
123128054
tae-r.2
for
123145148
hvu-r.1
for
123403787
sbi-r.1
for
8073183
bdi-r.1
for
100831961


Ortholog ID: 3246
Species ath ath bra bra bna bna ghi ghi ghi cit gma gma vvi ppo mtr nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol UBP21 UBP20 LOC103827712 LOC103853739 LOC106440210 LOC106381839 LOC107924804 LOC107939754 LOC107950189 LOC102625507 LOC100806936 LOC100808015 LOC104882327 LOC18096977 LOC11424860 LOC107826307 LOC107814694 LOC107771185 LOC4330388 LOC103653937 LOC103627580 LOC123137837 LOC123128054 LOC123145148 LOC123403787 LOC8073183 LOC100831961
Function* ubiquitin-specific protease 21 ubiquitin-specific protease 20 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 20 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 20 ubiquitin carboxyl-terminal hydrolase 20 ubiquitin carboxyl-terminal hydrolase 20 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 20 ubiquitin carboxyl-terminal hydrolase 20 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 24 ubiquitin carboxyl-terminal hydrolase 20 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 20 uncharacterized LOC107771185 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 21-like ubiquitin carboxyl-terminal hydrolase 20 ubiquitin carboxyl-terminal hydrolase 21
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 4
ath03440 Homologous recombination 4
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
ath03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 3
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 9
ghi03030 DNA replication 7
ghi03420 Nucleotide excision repair 7
ghi03410 Base excision repair 4
ghi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 6
ghi00010 Glycolysis / Gluconeogenesis 4
ghi00040 Pentose and glucuronate interconversions 4
ghi00053 Ascorbate and aldarate metabolism 4
ghi00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03440 Homologous recombination 2
cit03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 7
gma03410 Base excision repair 6
gma03420 Nucleotide excision repair 5
gma03430 Mismatch repair 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 4
vvi03410 Base excision repair 4
vvi03420 Nucleotide excision repair 4
vvi03430 Mismatch repair 3
vvi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00240 Pyrimidine metabolism 3
mtr01232 Nucleotide metabolism 3
mtr03030 DNA replication 2
mtr03440 Homologous recombination 2
mtr00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 4
nta00240 Pyrimidine metabolism 4
nta00480 Glutathione metabolism 4
nta01232 Nucleotide metabolism 4
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
nta04144 Endocytosis 2
nta04517 IgSF CAM signaling 2
nta05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta04120 Ubiquitin mediated proteolysis 4
nta04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 2
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 2
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae00480 Glutathione metabolism 3
tae01232 Nucleotide metabolism 3
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae00480 Glutathione metabolism 3
tae01232 Nucleotide metabolism 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 4
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae00480 Glutathione metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 2
sbi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 3
bdi00270 Cysteine and methionine metabolism 2
bdi03440 Homologous recombination 2
bdi03030 DNA replication 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834717 827513 103827712 103853739 106440210 106381839 107924804 107939754 107950189 102625507 100806936 100808015 104882327 18096977 11424860 107826307 107814694 107771185 4330388 103653937 103627580 123137837 123128054 123145148 123403787 8073183 100831961
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