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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G47610   RING/U-box superfamily protein 
 ath-u.5   AT5G47610   RING/U-box superfamily protein 
 ath-r.7   AT5G47610   RING/U-box superfamily protein 
 ath-e.2   AT5G47610   RING/U-box superfamily protein 
 ath-m.4.bio   AT5G47610   RING/U-box superfamily protein 
 ath-m.4.hor   AT5G47610   RING/U-box superfamily protein 
 ath-m.4.lig   AT5G47610   RING/U-box superfamily protein 
 ath-m.4.str   AT5G47610   RING/U-box superfamily protein 
 ath-m.4.tis   AT5G47610   RING/U-box superfamily protein 
 bra-r.6   103853825   RING-H2 finger protein ATL79 
 bra-r.6   103827633   RING-H2 finger protein ATL79 
 bna-r.1   106436904   RING-H2 finger protein ATL79-like 
 bna-r.1   106409018   RING-H2 finger protein ATL79-like 
 bna-r.1   106399489   RING-H2 finger protein ATL79-like 
 ghi-r.1   107930159   RING-H2 finger protein ATL79 
 ghi-r.1   107922978   RING-H2 finger protein ATL79 
 ghi-r.1   107912038   RING-H2 finger protein ATL79 
 vvi-u.5   100242834   RING-H2 finger protein ATL79 
 ppo-u.5   7489062   RING-H2 finger protein ATL79 
 ppo-u.5   7480353   RING-H2 finger protein ATL79 

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Top 50 coexpressed genes to AT5G47610 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G47610 (ath-m.9 coexpression data)

CoexMap"834811"


athAT5G47610 | Entrez gene ID : 834811      
Species ath bra bna ghi vvi ppo cit mtr osa hvu tae nta gma cre sot zma bdi sbi sly
Paralog 9 2 3 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_199572.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1,  extr 1,  vacu 1  (predict for NP_199572.1)
Subcellular
localization
TargetP
chlo 5  (predict for NP_199572.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G47610
ath-u.5
for
AT5G47610
ath-r.7
for
AT5G47610
ath-e.2
for
AT5G47610
ath-m.4.bio
for
AT5G47610
ath-m.4.hor
for
AT5G47610
ath-m.4.lig
for
AT5G47610
ath-m.4.str
for
AT5G47610
ath-m.4.tis
for
AT5G47610
bra-r.6
for
103853825
bra-r.6
for
103827633
bna-r.1
for
106436904
bna-r.1
for
106409018
bna-r.1
for
106399489
ghi-r.1
for
107930159
ghi-r.1
for
107922978
ghi-r.1
for
107912038
vvi-u.5
for
100242834
ppo-u.5
for
7489062
ppo-u.5
for
7480353


Ortholog ID: 12449
Species ath bra bra bna bna bna ghi ghi ghi vvi ppo ppo
Symbol AT5G47610 LOC103853825 LOC103827633 LOC106436904 LOC106409018 LOC106399489 LOC107930159 LOC107922978 LOC107904535 LOC100242834 LOC7489062 LOC7480353
Function* RING/U-box superfamily protein RING-H2 finger protein ATL79 RING-H2 finger protein ATL79 RING-H2 finger protein ATL79-like RING-H2 finger protein ATL79-like RING-H2 finger protein ATL79-like RING-H2 finger protein ATL79 RING-H2 finger protein ATL79 RING-H2 finger protein ATL79 RING-H2 finger protein ATL79 RING-H2 finger protein ATL79 RING-H2 finger protein ATL79
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra02010 ABC transporters 2
bra04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00073 Cutin, suberine and wax biosynthesis 5
bna04075 Plant hormone signal transduction 4
bna04712 Circadian rhythm - plant 4
bna00062 Fatty acid elongation 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00270 Cysteine and methionine metabolism 2
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00905 Brassinosteroid biosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00905 Brassinosteroid biosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 5
vvi03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834811 103853825 103827633 106436904 106409018 106399489 107930159 107922978 107904535 100242834 7489062 7480353
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