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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G49400   zinc knuckle (CCHC-type) family protein 
 ath-u.5   AT5G49400   zinc knuckle (CCHC-type) family protein 
 ath-r.7   AT5G49400   zinc knuckle (CCHC-type) family protein 
 ath-e.2   AT5G49400   zinc knuckle (CCHC-type) family protein 
 ath-m.4.bio   AT5G49400   zinc knuckle (CCHC-type) family protein 
 ath-m.4.hor   AT5G49400   zinc knuckle (CCHC-type) family protein 
 ath-m.4.lig   AT5G49400   zinc knuckle (CCHC-type) family protein 
 ath-m.4.str   AT5G49400   zinc knuckle (CCHC-type) family protein 
 ath-m.4.tis   AT5G49400   zinc knuckle (CCHC-type) family protein 
 bra-r.6   103854605   zinc finger CCHC domain-containing protein 10 
 bra-r.6   103874624   zinc finger CCHC domain-containing protein 10 
 bna-r.1   106382508   zinc finger CCHC domain-containing protein 10 
 bna-r.1   106348870   zinc finger CCHC domain-containing protein 10 
 bna-r.1   106402974   zinc finger CCHC domain-containing protein 10-like 
 ghi-r.1   107916203   zinc finger CCHC domain-containing protein 10 
 ghi-r.1   107926479   pre-mRNA-splicing factor CWC22 homolog 
 ghi-r.1   107896623   zinc finger CCHC domain-containing protein 10 
 cit-r.1   102623780   uncharacterized LOC102623780 
 cit-r.1   102609717   uncharacterized LOC102609717 
 gma-u.5   100807084   zinc finger CCHC domain-containing protein 
 gma-u.5   100791564   zinc finger CCHC domain-containing protein 10 
 vvi-u.5   100258605   uncharacterized LOC100258605 
 ppo-u.5   7475517   uncharacterized LOC7475517 
 ppo-u.5   18101478   uncharacterized LOC18101478 
 mtr-u.5   112421356   zinc finger CCHC domain-containing protein 10 
 sly-u.5   101261150   uncharacterized LOC101261150 
 sot-r.1   102601628   zinc finger CCHC domain-containing protein 10 
 nta-r.1   107766906   uncharacterized LOC107766906 
 nta-r.1   107776525   uncharacterized LOC107776525 
 osa-u.5   4350003   uncharacterized LOC4350003 
 zma-u.5   100217191   uncharacterized LOC100217191 
 zma-u.5   101027165   zinc finger CCHC domain-containing protein 10 
 zma-u.5   118473507   chromobox protein homolog 8-like 
 tae-r.2   123148676   zinc finger CCHC domain-containing protein 10 
 hvu-r.1   123408725   zinc finger CCHC domain-containing protein 10 
 sbi-r.1   110433014   zinc finger CCHC domain-containing protein 10 
 bdi-r.1   100845365   zinc finger CCHC domain-containing protein 10 
 bdi-r.1   100840896   zinc finger CCHC domain-containing protein 10 
 bdi-r.1   100840400   zinc finger CCHC domain-containing protein 10 
 cre-r.1   CHLRE_12g529200v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G49400 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G49400 (ath-m.9 coexpression data)

CoexMap"835000"


athAT5G49400 | Entrez gene ID : 835000      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 2 2 1 2 1 1 1 2 1 3 1 1 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_199751.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_199751.2)
Subcellular
localization
TargetP
other 6  (predict for NP_199751.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G49400
ath-u.5
for
AT5G49400
ath-r.7
for
AT5G49400
ath-e.2
for
AT5G49400
ath-m.4.bio
for
AT5G49400
ath-m.4.hor
for
AT5G49400
ath-m.4.lig
for
AT5G49400
ath-m.4.str
for
AT5G49400
ath-m.4.tis
for
AT5G49400
bra-r.6
for
103854605
bra-r.6
for
103874624
bna-r.1
for
106382508
bna-r.1
for
106348870
bna-r.1
for
106402974
ghi-r.1
for
107916203
ghi-r.1
for
107926479
ghi-r.1
for
107896623
cit-r.1
for
102623780
cit-r.1
for
102609717
gma-u.5
for
100807084
gma-u.5
for
100791564
vvi-u.5
for
100258605
ppo-u.5
for
7475517
ppo-u.5
for
18101478
mtr-u.5
for
112421356
sly-u.5
for
101261150
sot-r.1
for
102601628
nta-r.1
for
107766906
nta-r.1
for
107776525
osa-u.5
for
4350003
zma-u.5
for
100217191
zma-u.5
for
101027165
zma-u.5
for
118473507
tae-r.2
for
123148676
hvu-r.1
for
123408725
sbi-r.1
for
110433014
bdi-r.1
for
100845365
bdi-r.1
for
100840896
bdi-r.1
for
100840400
cre-r.1
for
CHLRE_12g529200v5


Ortholog ID: 4631
Species ath bra bra bna bna bna ghi ghi ghi cit cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma zma tae tae hvu sbi bdi bdi bdi cre
Symbol AT5G49400 LOC103854605 LOC103874624 LOC106348870 LOC106402974 LOC106348809 LOC107896623 LOC107892113 LOC107888952 LOC102623780 LOC102609717 LOC100807084 LOC100791564 LOC100258605 LOC7475517 LOC18101478 LOC112421356 LOC101261150 LOC102601628 LOC107776525 LOC107788290 LOC4350003 LOC100217191 LOC101027165 LOC118473507 LOC123155797 LOC123164676 LOC123408725 LOC110433014 LOC100845365 LOC100840896 LOC100840400 CHLRE_12g529200v5
Function* zinc knuckle (CCHC-type) family protein zinc finger CCHC domain-containing protein 10 zinc finger CCHC domain-containing protein 10 zinc finger CCHC domain-containing protein 10 zinc finger CCHC domain-containing protein 10-like zinc finger CCHC domain-containing protein 10 zinc finger CCHC domain-containing protein 10 zinc finger CCHC domain-containing protein 10 zinc finger CCHC domain-containing protein 10 uncharacterized LOC102623780 uncharacterized LOC102609717 zinc finger CCHC domain-containing protein zinc finger CCHC domain-containing protein 10 uncharacterized LOC100258605 uncharacterized LOC7475517 uncharacterized LOC18101478 zinc finger CCHC domain-containing protein 10 uncharacterized LOC101261150 zinc finger CCHC domain-containing protein 10 uncharacterized LOC107776525 uncharacterized LOC107788290 uncharacterized LOC4350003 uncharacterized LOC100217191 zinc finger CCHC domain-containing protein 10 chromobox protein homolog 8-like zinc finger CCHC domain-containing protein 10 zinc finger CCHC domain-containing protein 10 zinc finger CCHC domain-containing protein 10 zinc finger CCHC domain-containing protein 10 zinc finger CCHC domain-containing protein 10 zinc finger CCHC domain-containing protein 10 zinc finger CCHC domain-containing protein 10 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03008 Ribosome biogenesis in eukaryotes 3
ath04712 Circadian rhythm - plant 3
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa03008 Ribosome biogenesis in eukaryotes 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 6
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835000 103854605 103874624 106348870 106402974 106348809 107896623 107892113 107888952 102623780 102609717 100807084 100791564 100258605 7475517 18101478 112421356 101261150 102601628 107776525 107788290 4350003 100217191 101027165 118473507 123155797 123164676 123408725 110433014 100845365 100840896 100840400 5722430
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