ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	WRKY48	WRKY DNA-binding protein 48
ath-u.5	WRKY48	WRKY DNA-binding protein 48
ath-r.7	WRKY48	WRKY DNA-binding protein 48
ath-e.2	WRKY48	WRKY DNA-binding protein 48
ath-m.4.bio	WRKY48	WRKY DNA-binding protein 48
ath-m.4.hor	WRKY48	WRKY DNA-binding protein 48
ath-m.4.lig	WRKY48	WRKY DNA-binding protein 48
ath-m.4.str	WRKY48	WRKY DNA-binding protein 48
ath-m.4.tis	WRKY48	WRKY DNA-binding protein 48
bra-r.6	103854614	probable WRKY transcription factor 48
bra-r.6	WRKY48	probable WRKY transcription factor 48
bra-r.6	103837290	probable WRKY transcription factor 48
bna-r.1	111211541	probable WRKY transcription factor 48
bna-r.1	111200856	probable WRKY transcription factor 48
bna-r.1	106382505	probable WRKY transcription factor 48
ghi-r.1	121202831	probable WRKY transcription factor 48
ghi-r.1	107916226	probable WRKY transcription factor 48
ghi-r.1	107910567	probable WRKY transcription factor 48
cit-r.1	102613699	probable WRKY transcription factor 48
ppo-u.5	7485838	probable WRKY transcription factor 48
ppo-u.5	7485889	probable WRKY transcription factor 48
nta-r.1	107824266	putative WRKY transcription factor 48

Annotation

functional annotation

KEGG

GO BP

GO:0045893 [list] [network] positive regulation of DNA-templated transcription	(262 genes)	IDA
GO:0042742 [list] [network] defense response to bacterium	(363 genes)	IMP
GO:0009617 [list] [network] response to bacterium	(500 genes)	IEP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

IDA ISM

GO MF

GO:0000976 [list] [network] transcription cis-regulatory region binding	(716 genes)	IPI
GO:0003677 [list] [network] DNA binding	(1274 genes)	IDA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1620 genes)	ISS
GO:0005515 [list] [network] protein binding	(5363 genes)	IPI

Protein

NP_199763.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for NP_199763.1)

Subcellular
localization
TargetP

other 9

(predict for NP_199763.1)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for WRKY48	ath-u.5 for WRKY48	ath-r.7 for WRKY48	ath-e.2 for WRKY48	ath-m.4.bio for WRKY48	ath-m.4.hor for WRKY48	ath-m.4.lig for WRKY48	ath-m.4.str for WRKY48	ath-m.4.tis for WRKY48	bra-r.6 for 103854614	bra-r.6 for WRKY48	bra-r.6 for 103837290	bna-r.1 for 111211541	bna-r.1 for 111200856	bna-r.1 for 106382505	ghi-r.1 for 121202831	ghi-r.1 for 107916226	ghi-r.1 for 107910567	cit-r.1 for 102613699	ppo-u.5 for 7485838	ppo-u.5 for 7485889	nta-r.1 for 107824266