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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G50930   Histone superfamily protein 
 ath-m.4.bio   AT5G50930   Histone superfamily protein 
 ath-m.4.hor   AT5G50930   Histone superfamily protein 
 ath-m.4.lig   AT5G50930   Histone superfamily protein 
 ath-m.4.str   AT5G50930   Histone superfamily protein 
 ath-m.4.tis   AT5G50930   Histone superfamily protein 
 ghi-r.1   107943937   protein MHF1 homolog 
 ghi-r.1   107953585   protein MHF1 homolog 
 ghi-r.1   107896893   uncharacterized LOC107896893 
 cit-r.1   102627384   protein MHF1 homolog 
 gma-u.5   100798682   protein MHF1 homolog 
 vvi-u.5   100257797   centromere protein S-like 
 sot-r.1   102604779   MHF histone-fold complex subunit 1 
 nta-r.1   107793883   protein MHF1 homolog 
 nta-r.1   107784370   protein MHF1 homolog 
 osa-u.5   4335705   protein MHF1 homolog 
 zma-u.5   100277645   uncharacterized LOC100277645 
 tae-r.2   123185443   protein MHF1 homolog 
 tae-r.2   123053179   protein MHF1 homolog 
 tae-r.2   123041353   protein MHF1 homolog 
 hvu-r.1   123426579   protein MHF1 homolog 
 sbi-r.1   8070847   protein MHF1 homolog 
 bdi-r.1   100821064   protein MHF1 homolog 

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Top 50 coexpressed genes to AT5G50930 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G50930 (ath-m.9 coexpression data)

CoexMap"835166"


athAT5G50930 | Entrez gene ID : 835166      
Species ath ghi cit gma vvi sot nta osa zma tae hvu sbi bdi sly ppo bna mtr cre bra
Paralog 6 3 1 1 1 1 2 1 1 3 1 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006312 [list] [network] mitotic recombination  (5 genes)  IMP  
GO:0036297 [list] [network] interstrand cross-link repair  (9 genes)  IMP  
GO:0007129 [list] [network] homologous chromosome pairing at meiosis  (31 genes)  IGI  
GO:0007131 [list] [network] reciprocal meiotic recombination  (44 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0046982 [list] [network] protein heterodimerization activity  (86 genes)  IEA  
Protein NP_199906.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 1,  mito 1  (predict for NP_199906.1)
Subcellular
localization
TargetP
scret 6,  other 5  (predict for NP_199906.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G50930
ath-m.4.bio
for
AT5G50930
ath-m.4.hor
for
AT5G50930
ath-m.4.lig
for
AT5G50930
ath-m.4.str
for
AT5G50930
ath-m.4.tis
for
AT5G50930
ghi-r.1
for
107943937
ghi-r.1
for
107953585
ghi-r.1
for
107896893
cit-r.1
for
102627384
gma-u.5
for
100798682
vvi-u.5
for
100257797
sot-r.1
for
102604779
nta-r.1
for
107793883
nta-r.1
for
107784370
osa-u.5
for
4335705
zma-u.5
for
100277645
tae-r.2
for
123185443
tae-r.2
for
123053179
tae-r.2
for
123041353
hvu-r.1
for
123426579
sbi-r.1
for
8070847
bdi-r.1
for
100821064


Ortholog ID: 10990
Species ghi ghi ghi cit gma vvi sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107943937 LOC107953585 LOC107896893 LOC102627384 LOC100798682 LOC100257797 LOC102604779 LOC107793883 LOC107784370 LOC4335705 LOC100277645 LOC123185443 LOC123053179 LOC123041353 LOC123426579 LOC8070847 LOC100821064
Function* protein MHF1 homolog protein MHF1 homolog uncharacterized LOC107896893 protein MHF1 homolog protein MHF1 homolog centromere protein S-like MHF histone-fold complex subunit 1 protein MHF1 homolog protein MHF1 homolog protein MHF1 homolog uncharacterized LOC100277645 protein MHF1 homolog protein MHF1 homolog protein MHF1 homolog protein MHF1 homolog protein MHF1 homolog protein MHF1 homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 4
ghi03460 Fanconi anemia pathway 3
ghi03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 6
ghi03430 Mismatch repair 6
ghi03420 Nucleotide excision repair 4
ghi03460 Fanconi anemia pathway 3
ghi03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 5
cit03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 3
gma01232 Nucleotide metabolism 3
gma03030 DNA replication 2
gma03440 Homologous recombination 2
gma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 5
vvi03010 Ribosome 3
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 4
nta03460 Fanconi anemia pathway 4
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 5
nta03460 Fanconi anemia pathway 4
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 3
osa03420 Nucleotide excision repair 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
tae00190 Oxidative phosphorylation 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03460 Fanconi anemia pathway 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 4
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107943937 107953585 107896893 102627384 100798682 100257797 102604779 107793883 107784370 4335705 100277645 123185443 123053179 123041353 123426579 8070847 100821064
The preparation time of this page was 2.4 [sec].