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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   PKP-BETA1   plastidic pyruvate kinase beta subunit 1 
 ath-u.5   PKP-BETA1   plastidic pyruvate kinase beta subunit 1 
 ath-r.7   PKP-BETA1   plastidic pyruvate kinase beta subunit 1 
 ath-e.2   PKP-BETA1   plastidic pyruvate kinase beta subunit 1 
 ath-m.4.bio   PKP-BETA1   plastidic pyruvate kinase beta subunit 1 
 ath-m.4.hor   PKP-BETA1   plastidic pyruvate kinase beta subunit 1 
 ath-m.4.lig   PKP-BETA1   plastidic pyruvate kinase beta subunit 1 
 ath-m.4.str   PKP-BETA1   plastidic pyruvate kinase beta subunit 1 
 ath-m.4.tis   PKP-BETA1   plastidic pyruvate kinase beta subunit 1 
 ath-u.5   PKp3   plastidial pyruvate kinase 3 
 bra-r.6   103874746   plastidial pyruvate kinase 3, chloroplastic 
 bra-r.6   103852067   plastidial pyruvate kinase 2 
 bra-r.6   103849110   plastidial pyruvate kinase 2 
 bna-r.1   125608904   plastidial pyruvate kinase 3, chloroplastic-like 
 bna-r.1   106445600   plastidial pyruvate kinase 3, chloroplastic 
 bna-r.1   106391648   plastidial pyruvate kinase 2 
 ghi-r.1   107924635   pyruvate kinase isozyme G, chloroplastic 
 ghi-r.1   107947330   plastidial pyruvate kinase 2 
 ghi-r.1   107951846   plastidial pyruvate kinase 2 
 cit-r.1   102618099   plastidial pyruvate kinase 2 
 cit-r.1   102611699   pyruvate kinase isozyme G, chloroplastic 
 gma-u.5   100809327   plastidial pyruvate kinase 2 
 gma-u.5   100776984   pyruvate kinase isozyme G, chloroplastic 
 gma-u.5   100803036   plastidial pyruvate kinase 2 
 vvi-u.5   100257566   pyruvate kinase isozyme G, chloroplastic 
 vvi-u.5   100262029   plastidial pyruvate kinase 2 
 ppo-u.5   7489798   plastidial pyruvate kinase 2 
 ppo-u.5   7496010   pyruvate kinase isozyme G, chloroplastic 
 ppo-u.5   18096940   pyruvate kinase isozyme G, chloroplastic 
 mtr-u.5   25496020   plastidial pyruvate kinase 2 
 mtr-u.5   11419730   plastidial pyruvate kinase 2 
 mtr-u.5   11435634   pyruvate kinase isozyme G, chloroplastic 
 sly-u.5   101262183   plastidial pyruvate kinase 2 
 sly-u.5   101263236   pyruvate kinase isozyme G, chloroplastic 
 sot-r.1   102579422   plastidial pyruvate kinase 2 
 sot-r.1   102597674   pyruvate kinase isozyme G, chloroplastic 
 nta-r.1   107782907   plastidial pyruvate kinase 2 
 nta-r.1   107822892   pyruvate kinase isozyme G, chloroplastic 
 nta-r.1   107820699   plastidial pyruvate kinase 2-like 
 osa-u.5   4349454   pyruvate kinase isozyme G, chloroplastic 
 osa-u.5   4327173   plastidial pyruvate kinase 2 
 zma-u.5   606466   Pyruvate kinase 
 zma-u.5   100273990   uncharacterized LOC100273990 
 zma-u.5   100272999   Pyruvate kinase 
 tae-r.2   123078713   plastidial pyruvate kinase 2 
 tae-r.2   123051905   pyruvate kinase isozyme G, chloroplastic 
 tae-r.2   123061644   plastidial pyruvate kinase 2 
 hvu-r.1   123438709   pyruvate kinase isozyme G, chloroplastic 
 hvu-r.1   123444016   plastidial pyruvate kinase 2 
 sbi-r.1   8061808   pyruvate kinase isozyme G, chloroplastic 
 sbi-r.1   8055615   pyruvate kinase isozyme G, chloroplastic 
 bdi-r.1   100841333   plastidial pyruvate kinase 2 
 bdi-r.1   100830749   pyruvate kinase isozyme G, chloroplastic 

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Top 50 coexpressed genes to PKP-BETA1 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PKP-BETA1 (ath-m.9 coexpression data)

CoexMap"835369"


athPKP-BETA1 | Entrez gene ID : 835369      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 3 2 3 2 3 3 2 2 3 2 3 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00010 [list] [network] Glycolysis / Gluconeogenesis (119 genes)
ath00620 [list] [network] Pyruvate metabolism (97 genes)
ath01200 [list] [network] Carbon metabolism (275 genes)
ath01230 [list] [network] Biosynthesis of amino acids (242 genes)
GO BP
GO:0010431 [list] [network] seed maturation  (68 genes)  IMP  
GO:0006633 [list] [network] fatty acid biosynthetic process  (111 genes)  IMP  
GO:0006629 [list] [network] lipid metabolic process  (666 genes)  IGI  
GO:0048316 [list] [network] seed development  (775 genes)  IMP  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA IDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA IDA ISM  
GO MF
GO:0004743 [list] [network] pyruvate kinase activity  (3 genes)  IDA  
GO:0030955 [list] [network] potassium ion binding  (3 genes)  IDA  
GO:0000287 [list] [network] magnesium ion binding  (34 genes)  IDA  
Protein NP_200104.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for NP_200104.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_200104.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
PKP-BETA1
ath-u.5
for
PKP-BETA1
ath-r.7
for
PKP-BETA1
ath-e.2
for
PKP-BETA1
ath-m.4.bio
for
PKP-BETA1
ath-m.4.hor
for
PKP-BETA1
ath-m.4.lig
for
PKP-BETA1
ath-m.4.str
for
PKP-BETA1
ath-m.4.tis
for
PKP-BETA1
ath-u.5
for
PKp3
bra-r.6
for
103874746
bra-r.6
for
103852067
bra-r.6
for
103849110
bna-r.1
for
125608904
bna-r.1
for
106445600
bna-r.1
for
106391648
ghi-r.1
for
107924635
ghi-r.1
for
107947330
ghi-r.1
for
107951846
cit-r.1
for
102618099
cit-r.1
for
102611699
gma-u.5
for
100809327
gma-u.5
for
100776984
gma-u.5
for
100803036
vvi-u.5
for
100257566
vvi-u.5
for
100262029
ppo-u.5
for
7489798
ppo-u.5
for
7496010
ppo-u.5
for
18096940
mtr-u.5
for
25496020
mtr-u.5
for
11419730
mtr-u.5
for
11435634
sly-u.5
for
101262183
sly-u.5
for
101263236
sot-r.1
for
102579422
sot-r.1
for
102597674
nta-r.1
for
107782907
nta-r.1
for
107822892
nta-r.1
for
107820699
osa-u.5
for
4349454
osa-u.5
for
4327173
zma-u.5
for
606466
zma-u.5
for
100273990
zma-u.5
for
100272999
tae-r.2
for
123078713
tae-r.2
for
123051905
tae-r.2
for
123061644
hvu-r.1
for
123438709
hvu-r.1
for
123444016
sbi-r.1
for
8061808
sbi-r.1
for
8055615
bdi-r.1
for
100841333
bdi-r.1
for
100830749


Ortholog ID: 2676
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol PKP-BETA1 PKp3 LOC103874746 LOC103852067 LOC103849110 LOC106445600 LOC106409240 LOC125608738 LOC107947330 LOC107912192 LOC107945865 LOC102618099 LOC102611699 LOC100809327 LOC100776984 LOC100818193 LOC100257566 LOC100262029 LOC7489798 LOC7496010 LOC18096940 LOC25496020 LOC11419730 LOC11435634 LOC101262183 LOC101263236 LOC102579422 LOC102597674 LOC107822892 LOC107820699 LOC107783505 LOC4349454 LOC4327173 LOC606466 LOC100273990 LOC100272999 LOC123078713 LOC123070270 LOC123181626 LOC123438709 LOC123444016 LOC8061808 LOC8055615 LOC100841333 LOC100830749
Function* plastidic pyruvate kinase beta subunit 1 plastidial pyruvate kinase 3 plastidial pyruvate kinase 3, chloroplastic plastidial pyruvate kinase 2 plastidial pyruvate kinase 2 plastidial pyruvate kinase 3, chloroplastic plastidial pyruvate kinase 2 plastidial pyruvate kinase 3, chloroplastic-like plastidial pyruvate kinase 2 pyruvate kinase isozyme G, chloroplastic plastidial pyruvate kinase 2 plastidial pyruvate kinase 2 pyruvate kinase isozyme G, chloroplastic plastidial pyruvate kinase 2 pyruvate kinase isozyme G, chloroplastic plastidial pyruvate kinase 2 pyruvate kinase isozyme G, chloroplastic plastidial pyruvate kinase 2 plastidial pyruvate kinase 2 pyruvate kinase isozyme G, chloroplastic pyruvate kinase isozyme G, chloroplastic plastidial pyruvate kinase 2 plastidial pyruvate kinase 2 pyruvate kinase isozyme G, chloroplastic plastidial pyruvate kinase 2 pyruvate kinase isozyme G, chloroplastic plastidial pyruvate kinase 2 pyruvate kinase isozyme G, chloroplastic pyruvate kinase isozyme G, chloroplastic plastidial pyruvate kinase 2-like pyruvate kinase isozyme G, chloroplastic-like pyruvate kinase isozyme G, chloroplastic plastidial pyruvate kinase 2 Pyruvate kinase uncharacterized LOC100273990 Pyruvate kinase plastidial pyruvate kinase 2 plastidial pyruvate kinase 2 pyruvate kinase isozyme G, chloroplastic pyruvate kinase isozyme G, chloroplastic plastidial pyruvate kinase 2 pyruvate kinase isozyme G, chloroplastic pyruvate kinase isozyme G, chloroplastic plastidial pyruvate kinase 2 pyruvate kinase isozyme G, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 11
ath00620 Pyruvate metabolism 10
ath00010 Glycolysis / Gluconeogenesis 8
ath00785 Lipoic acid metabolism 7
ath00020 Citrate cycle (TCA cycle) 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 8
ath01200 Carbon metabolism 8
ath00010 Glycolysis / Gluconeogenesis 7
ath00020 Citrate cycle (TCA cycle) 5
ath00785 Lipoic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 6
bra00541 Biosynthesis of various nucleotide sugars 2
bra01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 13
bra01200 Carbon metabolism 13
bra00061 Fatty acid biosynthesis 9
bra01212 Fatty acid metabolism 9
bra00640 Propanoate metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 12
bra01200 Carbon metabolism 12
bra00010 Glycolysis / Gluconeogenesis 10
bra00020 Citrate cycle (TCA cycle) 6
bra00785 Lipoic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 5
bna00071 Fatty acid degradation 5
bna01212 Fatty acid metabolism 5
bna04146 Peroxisome 5
bna00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 10
bna01200 Carbon metabolism 10
bna00010 Glycolysis / Gluconeogenesis 6
bna00640 Propanoate metabolism 6
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 5
bna00071 Fatty acid degradation 5
bna01212 Fatty acid metabolism 5
bna04146 Peroxisome 5
bna00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 10
ghi00620 Pyruvate metabolism 8
ghi01200 Carbon metabolism 8
ghi00061 Fatty acid biosynthesis 8
ghi01212 Fatty acid metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi01240 Biosynthesis of cofactors 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00620 Pyruvate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 9
ghi01200 Carbon metabolism 9
ghi01240 Biosynthesis of cofactors 9
ghi00061 Fatty acid biosynthesis 9
ghi01212 Fatty acid metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 10
cit00620 Pyruvate metabolism 9
cit00010 Glycolysis / Gluconeogenesis 7
cit01230 Biosynthesis of amino acids 6
cit01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 10
gma01200 Carbon metabolism 10
gma00010 Glycolysis / Gluconeogenesis 8
gma00061 Fatty acid biosynthesis 6
gma01212 Fatty acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 13
gma01200 Carbon metabolism 13
gma00061 Fatty acid biosynthesis 10
gma01212 Fatty acid metabolism 10
gma00010 Glycolysis / Gluconeogenesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00061 Fatty acid biosynthesis 6
vvi00620 Pyruvate metabolism 6
vvi01200 Carbon metabolism 6
vvi00010 Glycolysis / Gluconeogenesis 5
vvi01212 Fatty acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00620 Pyruvate metabolism 5
ppo01200 Carbon metabolism 5
ppo00010 Glycolysis / Gluconeogenesis 4
ppo00061 Fatty acid biosynthesis 4
ppo04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00061 Fatty acid biosynthesis 9
mtr01212 Fatty acid metabolism 9
mtr00620 Pyruvate metabolism 9
mtr01200 Carbon metabolism 9
mtr01240 Biosynthesis of cofactors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00061 Fatty acid biosynthesis 8
mtr01212 Fatty acid metabolism 8
mtr00620 Pyruvate metabolism 8
mtr01200 Carbon metabolism 8
mtr01240 Biosynthesis of cofactors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00592 alpha-Linolenic acid metabolism 2
mtr00330 Arginine and proline metabolism 2
mtr00380 Tryptophan metabolism 2
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 10
sly00010 Glycolysis / Gluconeogenesis 9
sly00620 Pyruvate metabolism 9
sly01210 2-Oxocarboxylic acid metabolism 7
sly00020 Citrate cycle (TCA cycle) 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00620 Pyruvate metabolism 2
sly01200 Carbon metabolism 2
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 10
sot01210 2-Oxocarboxylic acid metabolism 4
sot00290 Valine, leucine and isoleucine biosynthesis 3
sot00770 Pantothenate and CoA biosynthesis 3
sot00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 2
sot01230 Biosynthesis of amino acids 2
sot00010 Glycolysis / Gluconeogenesis 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 3
nta00750 Vitamin B6 metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 12
nta00010 Glycolysis / Gluconeogenesis 5
nta00620 Pyruvate metabolism 5
nta01200 Carbon metabolism 5
nta00300 Lysine biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00620 Pyruvate metabolism 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00620 Pyruvate metabolism 3
osa01200 Carbon metabolism 3
osa00630 Glyoxylate and dicarboxylate metabolism 2
osa00592 alpha-Linolenic acid metabolism 2
osa00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00620 Pyruvate metabolism 9
osa01200 Carbon metabolism 9
osa01212 Fatty acid metabolism 7
osa00010 Glycolysis / Gluconeogenesis 7
osa00061 Fatty acid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00620 Pyruvate metabolism 10
zma00061 Fatty acid biosynthesis 9
zma01212 Fatty acid metabolism 9
zma01200 Carbon metabolism 8
zma00010 Glycolysis / Gluconeogenesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00620 Pyruvate metabolism 11
zma01200 Carbon metabolism 9
zma00061 Fatty acid biosynthesis 9
zma01212 Fatty acid metabolism 9
zma00010 Glycolysis / Gluconeogenesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 11
tae00010 Glycolysis / Gluconeogenesis 10
tae00620 Pyruvate metabolism 10
tae00785 Lipoic acid metabolism 7
tae00020 Citrate cycle (TCA cycle) 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 9
tae01200 Carbon metabolism 9
tae00620 Pyruvate metabolism 8
tae01240 Biosynthesis of cofactors 8
tae01212 Fatty acid metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01212 Fatty acid metabolism 9
tae00061 Fatty acid biosynthesis 8
tae00010 Glycolysis / Gluconeogenesis 7
tae00620 Pyruvate metabolism 7
tae01200 Carbon metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00010 Glycolysis / Gluconeogenesis 2
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 3
sbi00261 Monobactam biosynthesis 2
sbi00300 Lysine biosynthesis 2
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00061 Fatty acid biosynthesis 3
bdi01212 Fatty acid metabolism 3
bdi00620 Pyruvate metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00040 Pentose and glucuronate interconversions 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835369 840138 103874746 103852067 103849110 106445600 106409240 125608738 107947330 107912192 107945865 102618099 102611699 100809327 100776984 100818193 100257566 100262029 7489798 7496010 18096940 25496020 11419730 11435634 101262183 101263236 102579422 102597674 107822892 107820699 107783505 4349454 4327173 606466 100273990 100272999 123078713 123070270 123181626 123438709 123444016 8061808 8055615 100841333 100830749
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