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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G55600   Agenet and bromo-adjacent homology (BAH) domain-containing protein 
 ath-u.5   AT5G55600   Agenet and bromo-adjacent homology (BAH) domain-containing protein 
 ath-r.7   AT5G55600   Agenet and bromo-adjacent homology (BAH) domain-containing protein 
 ath-e.2   AT5G55600   Agenet and bromo-adjacent homology (BAH) domain-containing protein 
 ath-m.4.bio   AT5G55600   Agenet and bromo-adjacent homology (BAH) domain-containing protein 
 ath-m.4.hor   AT5G55600   Agenet and bromo-adjacent homology (BAH) domain-containing protein 
 ath-m.4.lig   AT5G55600   Agenet and bromo-adjacent homology (BAH) domain-containing protein 
 ath-m.4.str   AT5G55600   Agenet and bromo-adjacent homology (BAH) domain-containing protein 
 ath-m.4.tis   AT5G55600   Agenet and bromo-adjacent homology (BAH) domain-containing protein 
 bra-r.6   103845003   uncharacterized LOC103845003 
 bra-r.6   103856977   uncharacterized LOC103856977 
 bna-r.1   106390903   uncharacterized LOC106390903 
 bna-r.1   106371402   uncharacterized LOC106371402 
 bna-r.1   125600726   uncharacterized LOC125600726 
 ghi-r.1   107917838   uncharacterized LOC107917838 
 ghi-r.1   107922045   uncharacterized LOC107922045 
 cit-r.1   102614334   uncharacterized LOC102614334 
 cit-r.1   102616727   uncharacterized LOC102616727 
 gma-u.5   100812434   uncharacterized LOC100812434 
 gma-u.5   100306240   uncharacterized LOC100306240 
 gma-u.5   100816046   uncharacterized LOC100816046 
 vvi-u.5   100265203   uncharacterized LOC100265203 
 vvi-u.5   104878146   uncharacterized LOC104878146 
 ppo-u.5   7453592   uncharacterized LOC7453592 
 ppo-u.5   7495630   uncharacterized LOC7495630 
 ppo-u.5   7487534   uncharacterized LOC7487534 
 mtr-u.5   25489108   uncharacterized LOC25489108 
 mtr-u.5   11407168   uncharacterized LOC11407168 
 sly-u.5   101252099   uncharacterized LOC101252099 
 sot-r.1   102589315   uncharacterized LOC102589315 
 nta-r.1   107823461   uncharacterized LOC107823461 
 nta-r.1   107819009   uncharacterized LOC107819009 
 nta-r.1   107766548   uncharacterized LOC107766548 
 osa-u.5   9269932   uncharacterized LOC9269932 
 zma-u.5   100383244   agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein 
 tae-r.2   123187993   uncharacterized LOC123187993 
 tae-r.2   123052133   uncharacterized LOC123052133 
 tae-r.2   123044253   uncharacterized LOC123044253 
 hvu-r.1   123425369   uncharacterized LOC123425369 
 sbi-r.1   8060666   uncharacterized LOC8060666 
 bdi-r.1   100833465   uncharacterized LOC100833465 

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Top 50 coexpressed genes to AT5G55600 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G55600 (ath-m.9 coexpression data)

CoexMap"835654"


athAT5G55600 | Entrez gene ID : 835654      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 2 3 2 3 2 1 1 3 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003682 [list] [network] chromatin binding  (103 genes)  IEA  
Protein NP_001119443.1 [sequence] [blastp]
NP_001190547.1 [sequence] [blastp]
NP_200371.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  cyto 2,  chlo 1,  extr 1,  vacu 1,  cysk 1  (predict for NP_001119443.1)
nucl 4,  cyto_nucl 4,  cyto 2,  chlo 1,  extr 1,  vacu 1,  cysk 1  (predict for NP_001190547.1)
nucl 4,  cyto_nucl 4,  cyto 2,  chlo 1,  extr 1,  vacu 1,  cysk 1  (predict for NP_200371.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001119443.1)
other 9  (predict for NP_001190547.1)
other 9  (predict for NP_200371.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G55600
ath-u.5
for
AT5G55600
ath-r.7
for
AT5G55600
ath-e.2
for
AT5G55600
ath-m.4.bio
for
AT5G55600
ath-m.4.hor
for
AT5G55600
ath-m.4.lig
for
AT5G55600
ath-m.4.str
for
AT5G55600
ath-m.4.tis
for
AT5G55600
bra-r.6
for
103845003
bra-r.6
for
103856977
bna-r.1
for
106390903
bna-r.1
for
106371402
bna-r.1
for
125600726
ghi-r.1
for
107917838
ghi-r.1
for
107922045
cit-r.1
for
102614334
cit-r.1
for
102616727
gma-u.5
for
100812434
gma-u.5
for
100306240
gma-u.5
for
100816046
vvi-u.5
for
100265203
vvi-u.5
for
104878146
ppo-u.5
for
7453592
ppo-u.5
for
7495630
ppo-u.5
for
7487534
mtr-u.5
for
25489108
mtr-u.5
for
11407168
sly-u.5
for
101252099
sot-r.1
for
102589315
nta-r.1
for
107823461
nta-r.1
for
107819009
nta-r.1
for
107766548
osa-u.5
for
9269932
zma-u.5
for
100383244
tae-r.2
for
123187993
tae-r.2
for
123052133
tae-r.2
for
123044253
hvu-r.1
for
123425369
sbi-r.1
for
8060666
bdi-r.1
for
100833465


Ortholog ID: 6105
Species ath bra bra bna bna bna ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT5G55600 LOC103845003 LOC103856977 LOC106390903 LOC106371402 LOC125600726 LOC107917838 LOC107922045 LOC102614334 LOC102616727 LOC100812434 LOC100306240 LOC100816046 LOC100265203 LOC104878146 LOC7453592 LOC7495630 LOC7487534 LOC25489108 LOC11407168 LOC101252099 LOC102589315 LOC107823461 LOC107819009 LOC107766548 LOC9269932 LOC100383244 LOC123187993 LOC123052133 LOC123044253 LOC123425369 LOC8060666 LOC100833465
Function* Agenet and bromo-adjacent homology (BAH) domain-containing protein uncharacterized LOC103845003 uncharacterized LOC103856977 uncharacterized LOC106390903 uncharacterized LOC106371402 uncharacterized LOC125600726 uncharacterized LOC107917838 uncharacterized LOC107922045 uncharacterized LOC102614334 uncharacterized LOC102616727 uncharacterized LOC100812434 uncharacterized LOC100306240 uncharacterized LOC100816046 uncharacterized LOC100265203 uncharacterized LOC104878146 uncharacterized LOC7453592 uncharacterized LOC7495630 uncharacterized LOC7487534 uncharacterized LOC25489108 uncharacterized LOC11407168 uncharacterized LOC101252099 uncharacterized LOC102589315 uncharacterized LOC107823461 uncharacterized LOC107819009 uncharacterized LOC107766548 uncharacterized LOC9269932 agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein uncharacterized LOC123187993 uncharacterized LOC123052133 uncharacterized LOC123044253 uncharacterized LOC123425369 uncharacterized LOC8060666 uncharacterized LOC100833465
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00230 Purine metabolism 2
nta00500 Starch and sucrose metabolism 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835654 103845003 103856977 106390903 106371402 125600726 107917838 107922045 102614334 102616727 100812434 100306240 100816046 100265203 104878146 7453592 7495630 7487534 25489108 11407168 101252099 102589315 107823461 107819009 107766548 9269932 100383244 123187993 123052133 123044253 123425369 8060666 100833465
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