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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   MBD6   methyl-CPG-binding domain 6 
 ath-u.5   MBD6   methyl-CPG-binding domain 6 
 ath-r.7   MBD6   methyl-CPG-binding domain 6 
 ath-e.2   MBD6   methyl-CPG-binding domain 6 
 ath-m.4.bio   MBD6   methyl-CPG-binding domain 6 
 ath-m.4.hor   MBD6   methyl-CPG-binding domain 6 
 ath-m.4.lig   MBD6   methyl-CPG-binding domain 6 
 ath-m.4.str   MBD6   methyl-CPG-binding domain 6 
 ath-m.4.tis   MBD6   methyl-CPG-binding domain 6 
 ath-u.5   MBD5   methyl-CPG-binding domain protein 5 
 ath-u.5   MBD7   methyl-CPG-binding domain 7 
 bra-r.6   103846163   methyl-CpG-binding domain-containing protein 6 
 bra-r.6   103851580   methyl-CpG-binding domain-containing protein 6 
 bna-r.1   106417393   methyl-CpG-binding domain-containing protein 6-like 
 bna-r.1   106417396   methyl-CpG-binding domain-containing protein 6-like 
 ghi-r.1   107906554   methyl-CpG-binding domain-containing protein 5 
 ghi-r.1   107933455   methyl-CpG-binding domain-containing protein 5 
 ghi-r.1   107943631   methyl-CpG-binding domain-containing protein 5 
 cit-r.1   102623206   methyl-CpG-binding domain-containing protein 7 
 cit-r.1   102618715   uncharacterized LOC102618715 
 gma-u.5   100795916   methyl-CpG-binding domain-containing protein 7 
 gma-u.5   100779601   methyl-CpG-binding domain-containing protein 7-like 
 vvi-u.5   100853337   methyl-CpG-binding domain-containing protein 5 
 vvi-u.5   100255377   methyl-CpG-binding domain-containing protein 7 
 ppo-u.5   7485704   methyl-CpG-binding domain-containing protein 5 
 ppo-u.5   7488117   methyl-CpG-binding domain-containing protein 5 
 ppo-u.5   7488137   methyl-CpG-binding domain-containing protein 7 
 mtr-u.5   25491275   methyl-CpG-binding domain-containing protein 7 
 mtr-u.5   11412807   methyl-CpG-binding domain-containing protein 7 
 sly-u.5   MBD5   methyl-CpG-binding domain-containing protein 5 
 sly-u.5   101267579   methyl-CpG-binding domain-containing protein 7 
 sot-r.1   102579273   uncharacterized LOC102579273 
 sot-r.1   102585353   methyl-CpG-binding domain-containing protein 7 
 sot-r.1   102595289   methyl-CpG-binding domain-containing protein 5-like 
 nta-r.1   107832011   methyl-CpG-binding domain-containing protein 5-like 
 nta-r.1   107804382   methyl-CpG-binding domain-containing protein 5 
 nta-r.1   107785555   methyl-CpG-binding domain-containing protein 7 

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Top 50 coexpressed genes to MBD6 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MBD6 (ath-m.9 coexpression data)

CoexMap"836057"


athMBD6 | Entrez gene ID : 836057      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta bdi osa tae zma cre sbi hvu
Paralog 11 2 2 3 2 2 2 3 2 2 3 3 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005731 [list] [network] nucleolus organizer region  (2 genes)  IDA  
GO:0010370 [list] [network] perinucleolar chromocenter  (2 genes)  IDA  
GO:0000792 [list] [network] heterochromatin  (13 genes)  IDA  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0051747 [list] [network] cytosine C-5 DNA demethylase activity  (6 genes)  IDA  
GO:0008327 [list] [network] methyl-CpG binding  (20 genes)  IDA ISS  
GO:0019899 [list] [network] enzyme binding  (199 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_200746.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_200746.1)
Subcellular
localization
TargetP
other 7  (predict for NP_200746.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
MBD6
ath-u.5
for
MBD6
ath-r.7
for
MBD6
ath-e.2
for
MBD6
ath-m.4.bio
for
MBD6
ath-m.4.hor
for
MBD6
ath-m.4.lig
for
MBD6
ath-m.4.str
for
MBD6
ath-m.4.tis
for
MBD6
ath-u.5
for
MBD5
ath-u.5
for
MBD7
bra-r.6
for
103846163
bra-r.6
for
103851580
bna-r.1
for
106417393
bna-r.1
for
106417396
ghi-r.1
for
107906554
ghi-r.1
for
107933455
ghi-r.1
for
107943631
cit-r.1
for
102623206
cit-r.1
for
102618715
gma-u.5
for
100795916
gma-u.5
for
100779601
vvi-u.5
for
100853337
vvi-u.5
for
100255377
ppo-u.5
for
7485704
ppo-u.5
for
7488117
ppo-u.5
for
7488137
mtr-u.5
for
25491275
mtr-u.5
for
11412807
sly-u.5
for
MBD5
sly-u.5
for
101267579
sot-r.1
for
102579273
sot-r.1
for
102585353
sot-r.1
for
102595289
nta-r.1
for
107832011
nta-r.1
for
107804382
nta-r.1
for
107785555


Ortholog ID: 2480
Species ath ath ath bra bna ghi ghi cit gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sot sot sot nta nta nta
Symbol MBD6 MBD5 MBD7 LOC103846163 LOC106373484 LOC107933455 LOC107959114 LOC102618715 LOC100795916 LOC100779601 LOC100853337 LOC100255377 LOC7485704 LOC7488117 LOC7488137 LOC25491275 LOC11412807 MBD5 LOC101267579 LOC102579273 LOC102585353 LOC107057998 LOC107832011 LOC107804382 LOC107785555
Function* methyl-CPG-binding domain 6 methyl-CPG-binding domain protein 5 methyl-CPG-binding domain 7 methyl-CpG-binding domain-containing protein 6 methyl-CpG-binding domain-containing protein 5 methyl-CpG-binding domain-containing protein 5 methyl-CpG-binding domain-containing protein 5 uncharacterized LOC102618715 methyl-CpG-binding domain-containing protein 7 methyl-CpG-binding domain-containing protein 7-like methyl-CpG-binding domain-containing protein 5 methyl-CpG-binding domain-containing protein 7 methyl-CpG-binding domain-containing protein 5 methyl-CpG-binding domain-containing protein 5 methyl-CpG-binding domain-containing protein 7 methyl-CpG-binding domain-containing protein 7 methyl-CpG-binding domain-containing protein 7 methyl-CpG-binding domain-containing protein 5 methyl-CpG-binding domain-containing protein 7 uncharacterized LOC102579273 methyl-CpG-binding domain-containing protein 7 uncharacterized LOC107057998 methyl-CpG-binding domain-containing protein 5-like methyl-CpG-binding domain-containing protein 5 methyl-CpG-binding domain-containing protein 7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00541 Biosynthesis of various nucleotide sugars 2
ath01250 Biosynthesis of nucleotide sugars 2
ath04517 IgSF CAM signaling 2
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 3
ppo04145 Phagosome 3
ppo04142 Lysosome 3
ppo00900 Terpenoid backbone biosynthesis 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
ppo01230 Biosynthesis of amino acids 4
ppo00071 Fatty acid degradation 2
ppo00350 Tyrosine metabolism 2
ppo00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03250 Viral life cycle - HIV-1 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00430 Taurine and hypotaurine metabolism 4
sot00561 Glycerolipid metabolism 3
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 7
nta04016 MAPK signaling pathway - plant 4
nta04070 Phosphatidylinositol signaling system 4
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta04070 Phosphatidylinositol signaling system 4
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
nta04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 3
nta01232 Nucleotide metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836057 823811 836101 103846163 106373484 107933455 107959114 102618715 100795916 100779601 100853337 100255377 7485704 7488117 7488137 25491275 11412807 101267088 101267579 102579273 102585353 107057998 107832011 107804382 107785555
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