ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	HCA2	Dof-type zinc finger DNA-binding family protein
ath-u.5	HCA2	Dof-type zinc finger DNA-binding family protein
ath-r.7	HCA2	Dof-type zinc finger DNA-binding family protein
ath-e.2	HCA2	Dof-type zinc finger DNA-binding family protein
ath-m.4.bio	HCA2	Dof-type zinc finger DNA-binding family protein
ath-m.4.hor	HCA2	Dof-type zinc finger DNA-binding family protein
ath-m.4.lig	HCA2	Dof-type zinc finger DNA-binding family protein
ath-m.4.str	HCA2	Dof-type zinc finger DNA-binding family protein
ath-m.4.tis	HCA2	Dof-type zinc finger DNA-binding family protein
bra-r.6	103874731	dof zinc finger protein DOF5.6
bna-r.1	106424821	dof zinc finger protein DOF5.6-like
bna-r.1	106397411	dof zinc finger protein DOF5.6-like
bna-r.1	106366173	dof zinc finger protein DOF5.6
ghi-r.1	107933618	dof zinc finger protein DOF5.6
ghi-r.1	107890891	dof zinc finger protein DOF5.6
cit-r.1	102621113	dof zinc finger protein DOF5.6
gma-u.5	778107	dof zinc finger protein DOF5.6
gma-u.5	100815061	dof zinc finger protein DOF5.6
gma-u.5	100806697	dof zinc finger protein DOF5.6
vvi-u.5	100265549	dof zinc finger protein DOF5.6
ppo-u.5	7453769	dof zinc finger protein DOF5.6
ppo-u.5	7456845	dof zinc finger protein DOF5.6
mtr-u.5	11430187	dof zinc finger protein DOF5.6
sly-u.5	101253882	dof zinc finger protein DOF5.6-like
sly-u.5	101267243	dof zinc finger protein DOF5.6
sot-r.1	102596859	dof zinc finger protein DOF5.6-like
sot-r.1	102593793	dof zinc finger protein DOF5.6-like
nta-r.1	107807564	dof zinc finger protein DOF5.6
nta-r.1	107817016	dof zinc finger protein DOF5.6
nta-r.1	107795139	dof zinc finger protein DOF5.6-like
osa-u.5	4330470	dof zinc finger protein DOF3.1
zma-u.5	100216759	Dof zinc finger protein DOF2.1
zma-u.5	100193142	Dof zinc finger protein DOF2.1
tae-r.2	123137936	dof zinc finger protein DOF5.6
hvu-r.1	123402804	dof zinc finger protein DOF5.6-like
sbi-r.1	8073155	dof zinc finger protein DOF3.1
bdi-r.1	100825001	dof zinc finger protein DOF5.6

Annotation

functional annotation

KEGG

GO BP

GO:0090057 [list] [network] root radial pattern formation	(9 genes)	IGI
GO:0010067 [list] [network] procambium histogenesis	(10 genes)	IMP
GO:0010087 [list] [network] phloem or xylem histogenesis	(125 genes)	IMP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription	(262 genes)	IDA
GO:0006355 [list] [network] regulation of DNA-templated transcription	(1618 genes)	TAS

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

IDA ISM

GO MF

GO:0000976 [list] [network] transcription cis-regulatory region binding	(716 genes)	IPI
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1620 genes)	ISS TAS

Protein

NP_201099.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, chlo 1, extr 1, vacu 1

(predict for NP_201099.1)

Subcellular
localization
TargetP

other 7, chlo 5

(predict for NP_201099.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for HCA2	ath-u.5 for HCA2	ath-r.7 for HCA2	ath-e.2 for HCA2	ath-m.4.bio for HCA2	ath-m.4.hor for HCA2	ath-m.4.lig for HCA2	ath-m.4.str for HCA2	ath-m.4.tis for HCA2	bra-r.6 for 103874731	bna-r.1 for 106424821	bna-r.1 for 106397411	bna-r.1 for 106366173	ghi-r.1 for 107933618	ghi-r.1 for 107890891	cit-r.1 for 102621113	gma-u.5 for 778107	gma-u.5 for 100815061	gma-u.5 for 100806697	vvi-u.5 for 100265549	ppo-u.5 for 7453769	ppo-u.5 for 7456845	mtr-u.5 for 11430187	sly-u.5 for 101253882	sly-u.5 for 101267243	sot-r.1 for 102596859	sot-r.1 for 102593793	nta-r.1 for 107807564	nta-r.1 for 107817016	nta-r.1 for 107795139	osa-u.5 for 4330470	zma-u.5 for 100216759	zma-u.5 for 100193142	tae-r.2 for 123137936	hvu-r.1 for 123402804	sbi-r.1 for 8073155	bdi-r.1 for 100825001