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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   emb2746   RNA-metabolising metallo-beta-lactamase family protein 
 ath-u.5   emb2746   RNA-metabolising metallo-beta-lactamase family protein 
 ath-r.7   emb2746   RNA-metabolising metallo-beta-lactamase family protein 
 ath-e.2   emb2746   RNA-metabolising metallo-beta-lactamase family protein 
 ath-m.4.bio   emb2746   RNA-metabolising metallo-beta-lactamase family protein 
 ath-m.4.hor   emb2746   RNA-metabolising metallo-beta-lactamase family protein 
 ath-m.4.lig   emb2746   RNA-metabolising metallo-beta-lactamase family protein 
 ath-m.4.str   emb2746   RNA-metabolising metallo-beta-lactamase family protein 
 ath-m.4.tis   emb2746   RNA-metabolising metallo-beta-lactamase family protein 
 bra-r.6   103873754   ribonuclease J 
 bna-r.1   106347909   ribonuclease J 
 bna-r.1   106431255   ribonuclease J 
 ghi-r.1   107941047   ribonuclease J 
 ghi-r.1   107941974   ribonuclease J 
 ghi-r.1   107941244   ribonuclease J 
 cit-r.1   102606767   ribonuclease J 
 gma-u.5   100814619   ribonuclease J 
 gma-u.5   100783850   ribonuclease J 
 gma-u.5   100779771   ribonuclease J 
 vvi-u.5   100268000   ribonuclease J 
 ppo-u.5   7454544   ribonuclease J 
 ppo-u.5   7463114   ribonuclease J 
 mtr-u.5   11405571   ribonuclease J 
 mtr-u.5   11427815   ribonuclease J 
 sly-u.5   101264202   ribonuclease J 
 sot-r.1   102586834   ribonuclease J 
 nta-r.1   107797349   ribonuclease J 
 nta-r.1   107767987   ribonuclease J 
 osa-u.5   4329586   ribonuclease J 
 zma-u.5   103654858   ribonuclease J 
 zma-u.5   103626744   uncharacterized LOC103626744 
 tae-r.2   123144543   ribonuclease J 
 tae-r.2   123137233   ribonuclease J 
 tae-r.2   123127439   ribonuclease J 
 hvu-r.1   123401271   ribonuclease J 
 sbi-r.1   8079424   ribonuclease J 
 bdi-r.1   100825739   ribonuclease J 
 cre-r.1   CHLRE_16g683050v5   uncharacterized protein 

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Top 50 coexpressed genes to emb2746 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to emb2746 (ath-m.9 coexpression data)

CoexMap"836461"


athemb2746 | Entrez gene ID : 836461      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 3 1 3 1 2 2 1 1 2 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009942 [list] [network] longitudinal axis specification  (9 genes)  IMP  
GO:0060918 [list] [network] auxin transport  (100 genes)  IEP  
GO:0009658 [list] [network] chloroplast organization  (197 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP NAS  
GO:0009416 [list] [network] response to light stimulus  (776 genes)  IEP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA IDA  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0008409 [list] [network] 5'-3' exonuclease activity  (7 genes)  IDA  
GO:0004519 [list] [network] endonuclease activity  (114 genes)  IDA  
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_201147.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for NP_201147.2)
Subcellular
localization
TargetP
chlo 8  (predict for NP_201147.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
emb2746
ath-u.5
for
emb2746
ath-r.7
for
emb2746
ath-e.2
for
emb2746
ath-m.4.bio
for
emb2746
ath-m.4.hor
for
emb2746
ath-m.4.lig
for
emb2746
ath-m.4.str
for
emb2746
ath-m.4.tis
for
emb2746
bra-r.6
for
103873754
bna-r.1
for
106347909
bna-r.1
for
106431255
ghi-r.1
for
107941047
ghi-r.1
for
107941974
ghi-r.1
for
107941244
cit-r.1
for
102606767
gma-u.5
for
100814619
gma-u.5
for
100783850
gma-u.5
for
100779771
vvi-u.5
for
100268000
ppo-u.5
for
7454544
ppo-u.5
for
7463114
mtr-u.5
for
11405571
mtr-u.5
for
11427815
sly-u.5
for
101264202
sot-r.1
for
102586834
nta-r.1
for
107797349
nta-r.1
for
107767987
osa-u.5
for
4329586
zma-u.5
for
103654858
zma-u.5
for
103626744
tae-r.2
for
123144543
tae-r.2
for
123137233
tae-r.2
for
123127439
hvu-r.1
for
123401271
sbi-r.1
for
8079424
bdi-r.1
for
100825739
cre-r.1
for
CHLRE_16g683050v5


Ortholog ID: 7394
Species ath bra bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol emb2746 LOC103873754 LOC106347909 LOC106431255 LOC107941974 LOC107941244 LOC107886233 LOC102606767 LOC100814619 LOC100783850 LOC100779771 LOC100268000 LOC7454544 LOC7463114 LOC11405571 LOC11427815 LOC101264202 LOC102586834 LOC107797349 LOC107767987 LOC4329586 LOC103654858 LOC103626744 LOC123144543 LOC123137233 LOC123127439 LOC123401271 LOC8079424 LOC100825739 CHLRE_16g683050v5
Function* RNA-metabolising metallo-beta-lactamase family protein ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J uncharacterized LOC103626744 ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J ribonuclease J uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00061 Fatty acid biosynthesis 8
mtr01212 Fatty acid metabolism 8
mtr00620 Pyruvate metabolism 8
mtr01200 Carbon metabolism 8
mtr01240 Biosynthesis of cofactors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 5
cre00500 Starch and sucrose metabolism 4
cre01200 Carbon metabolism 3
cre00220 Arginine biosynthesis 2
cre00250 Alanine, aspartate and glutamate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836461 103873754 106347909 106431255 107941974 107941244 107886233 102606767 100814619 100783850 100779771 100268000 7454544 7463114 11405571 11427815 101264202 102586834 107797349 107767987 4329586 103654858 103626744 123144543 123137233 123127439 123401271 8079424 100825739 5717591
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