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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9  AT5G63440  hypothetical protein (DUF167) 
 ath-u.5  AT5G63440  hypothetical protein (DUF167) 
 ath-r.7  AT5G63440  hypothetical protein (DUF167) 
 ath-e.2  AT5G63440  hypothetical protein (DUF167) 
 ath-m.4.bio  AT5G63440  hypothetical protein (DUF167) 
 ath-m.4.hor  AT5G63440  hypothetical protein (DUF167) 
 ath-m.4.lig  AT5G63440  hypothetical protein (DUF167) 
 ath-m.4.str  AT5G63440  hypothetical protein (DUF167) 
 ath-m.4.tis  AT5G63440  hypothetical protein (DUF167) 
 bra-r.6  103873755  UPF0235 protein At5g63440 
 bna-r.1  106347910  UPF0235 protein At5g63440-like 
 bna-r.1  111208809  UPF0235 protein At5g63440 
 ghi-r.1  107886246  UPF0235 protein At5g63440 
 ghi-r.1  107950188  UPF0235 protein At5g63440 
 cit-r.1  102608618  UPF0235 protein At5g63440 
 gma-u.5  100306581  PWWP-DOMAIN INTERACTOR OF POLYCOMBS1-like 
 vvi-u.5  100247416  UPF0235 protein At5g63440 
 ppo-u.5  7484469  UPF0235 protein At5g63440 
 ppo-u.5  7463120  UPF0235 protein At5g63440 
 mtr-u.5  112417490  UPF0235 protein At5g63440 
 sly-u.5  101262801  UPF0235 protein At5g63440 
 sot-r.1  102584183  UPF0235 protein At5g63440 
 nta-r.1  107814906  UPF0235 protein At5g63440 
 nta-r.1  107782093  UPF0235 protein At5g63440 
 osa-u.5  4342960  UPF0235 protein At5g63440 
 zma-u.5  100193457  uncharacterized LOC100193457 
 tae-r.2  123051582  UPF0235 protein At5g63440 
 tae-r.2  123187518  UPF0235 protein At5g63440 
 tae-r.2  123043726  UPF0235 protein At5g63440 
 hvu-r.1  123424746  UPF0235 protein At5g63440 
 sbi-r.1  110432206  UPF0235 protein At5g63440 
 bdi-r.1  100832887  UPF0235 protein At5g63440 
 cre-r.1  CHLRE_12g485750v5  uncharacterized protein 

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Top 50 coexpressed genes to AT5G63440 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G63440 (ath-m.9 coexpression data)

CoexMap"836463"


athAT5G63440 | Entrez gene ID : 836463
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 2 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0097167 [list] [network] circadian regulation of translation  (1 genes)  IMP  
GO:2000306 [list] [network] positive regulation of photomorphogenesis  (8 genes)  IGI IMP  
GO:0009640 [list] [network] photomorphogenesis  (77 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001078789.1 [sequence] [blastp]
NP_568972.2 [sequence] [blastp]
NP_851256.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  plas 1  (predict for NP_001078789.1)
chlo 3,  plas 3,  mito 1,  pero 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for NP_568972.2)
chlo 3,  cyto 3,  plas 2,  nucl 1,  mito 1,  pero 1  (predict for NP_851256.1)
Subcellular
localization
TargetP
chlo 4,  other 4  (predict for NP_001078789.1)
other 9  (predict for NP_568972.2)
other 9  (predict for NP_851256.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G63440


ath-u.5
for
AT5G63440


ath-r.7
for
AT5G63440


ath-e.2
for
AT5G63440


ath-m.4.bio
for
AT5G63440


ath-m.4.hor
for
AT5G63440


ath-m.4.lig
for
AT5G63440


ath-m.4.str
for
AT5G63440


ath-m.4.tis
for
AT5G63440


bra-r.6
for
103873755


bna-r.1
for
106347910


bna-r.1
for
111208809


ghi-r.1
for
107886246


ghi-r.1
for
107950188


cit-r.1
for
102608618


gma-u.5
for
100306581


vvi-u.5
for
100247416


ppo-u.5
for
7484469


ppo-u.5
for
7463120


mtr-u.5
for
112417490


sly-u.5
for
101262801


sot-r.1
for
102584183


nta-r.1
for
107814906


nta-r.1
for
107782093


osa-u.5
for
4342960


zma-u.5
for
100193457


tae-r.2
for
123051582


tae-r.2
for
123187518


tae-r.2
for
123043726


hvu-r.1
for
123424746


sbi-r.1
for
110432206


bdi-r.1
for
100832887


cre-r.1
for
CHLRE_12g485750v5



Ortholog ID: 10415
Species ath bra bna bna ghi ghi cit gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT5G63440 LOC103873755 LOC106347910 LOC111208809 LOC107886246 LOC107950188 LOC102608618 LOC100306581 LOC100247416 LOC7484469 LOC7463120 LOC112417490 LOC101262801 LOC102584183 LOC107814906 LOC107782093 LOC4342960 LOC100193457 LOC123051582 LOC123187518 LOC123043726 LOC123424746 LOC110432206 LOC100832887 CHLRE_12g485750v5
Function* hypothetical protein (DUF167) UPF0235 protein At5g63440 UPF0235 protein At5g63440-like UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 PWWP-DOMAIN INTERACTOR OF POLYCOMBS1-like UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 uncharacterized LOC100193457 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 UPF0235 protein At5g63440 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03040 Spliceosome 6
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03040 Spliceosome 6
bna03082 ATP-dependent chromatin remodeling 4
bna03083 Polycomb repressive complex 4
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit00190 Oxidative phosphorylation 4
cit04120 Ubiquitin mediated proteolysis 3
cit03420 Nucleotide excision repair 2
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04142 Lysosome 6
cre00190 Oxidative phosphorylation 6
cre04145 Phagosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836463 103873755 106347910 111208809 107886246 107950188 102608618 100306581 100247416 7484469 7463120 112417490 101262801 102584183 107814906 107782093 4342960 100193457 123051582 123187518 123043726 123424746 110432206 100832887 5716614
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