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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   MEF3   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   MEF3   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-r.7   MEF3   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-e.2   MEF3   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.bio   MEF3   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.hor   MEF3   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.lig   MEF3   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.str   MEF3   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.tis   MEF3   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103844068   pentatricopeptide repeat-containing protein At1g06140, mitochondrial 
 bna-r.1   106410141   pentatricopeptide repeat-containing protein At1g06140, mitochondrial-like 
 bna-r.1   125575364   pentatricopeptide repeat-containing protein At1g06140, mitochondrial-like 
 ghi-r.1   107922706   pentatricopeptide repeat-containing protein At1g06140, mitochondrial 
 ghi-r.1   107923183   pentatricopeptide repeat-containing protein At1g06140, mitochondrial 
 vvi-u.5   100247030   pentatricopeptide repeat-containing protein At1g06140, mitochondrial 

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Top 50 coexpressed genes to MEF3 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MEF3 (ath-m.9 coexpression data)

CoexMap"837123"


athMEF3 | Entrez gene ID : 837123      
Species ath bra bna ghi vvi sbi osa gma sot sly cit mtr tae hvu ppo zma cre nta bdi
Paralog 9 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080156 [list] [network] mitochondrial mRNA modification  (26 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IMP ISM  
GO MF
Protein NP_172104.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  E.R. 1,  cyto 1,  mito 1,  cysk_nucl 1,  nucl_plas 1,  E.R._vacu 1,  E.R._plas 1  (predict for NP_172104.1)
Subcellular
localization
TargetP
mito 4  (predict for NP_172104.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
MEF3
ath-u.5
for
MEF3
ath-r.7
for
MEF3
ath-e.2
for
MEF3
ath-m.4.bio
for
MEF3
ath-m.4.hor
for
MEF3
ath-m.4.lig
for
MEF3
ath-m.4.str
for
MEF3
ath-m.4.tis
for
MEF3
bra-r.6
for
103844068
bna-r.1
for
106410141
bna-r.1
for
125575364
ghi-r.1
for
107922706
ghi-r.1
for
107923183
vvi-u.5
for
100247030


Ortholog ID: 16843
Species ath bra bna bna ghi ghi vvi
Symbol MEF3 LOC103844068 LOC106410141 LOC125575364 LOC107922706 LOC107923183 LOC100247030
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g06140, mitochondrial pentatricopeptide repeat-containing protein At1g06140, mitochondrial-like pentatricopeptide repeat-containing protein At1g06140, mitochondrial-like pentatricopeptide repeat-containing protein At1g06140, mitochondrial pentatricopeptide repeat-containing protein At1g06140, mitochondrial pentatricopeptide repeat-containing protein At1g06140, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 3
ghi00730 Thiamine metabolism 3
ghi01232 Nucleotide metabolism 3
ghi01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837123 103844068 106410141 125575364 107922706 107923183 100247030
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