Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT1G06170   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.bio   AT1G06170   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.hor   AT1G06170   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.lig   AT1G06170   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.str   AT1G06170   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.tis   AT1G06170   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 bra-r.6   103867902   transcription factor bHLH10 
 bna-r.1   106395228   transcription factor bHLH10-like 
 bna-r.1   106450080   transcription factor bHLH10-like 
 ghi-r.1   107962100   transcription factor bHLH91 
 ghi-r.1   107900569   transcription factor bHLH91 
 ghi-r.1   107962098   transcription factor bHLH91 
 cit-r.1   102627690   transcription factor bHLH91-like 
 ppo-u.5   7497650   transcription factor bHLH91 
 sly-u.5   101251221   transcription factor bHLH91-like 

close


Top 50 coexpressed genes to AT1G06170 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT1G06170 (ath-m.9 coexpression data)

CoexMap"837126"


athAT1G06170 | Entrez gene ID : 837126      
Species ath bra bna ghi cit ppo sly zma nta gma sot osa hvu mtr cre tae bdi vvi sbi
Paralog 6 1 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048658 [list] [network] anther wall tapetum development  (24 genes)  IGI  
GO:0052543 [list] [network] callose deposition in cell wall  (30 genes)  IGI  
GO:0009555 [list] [network] pollen development  (385 genes)  IGI  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEP TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0070888 [list] [network] E-box binding  (1 genes)  IPI  
GO:0046983 [list] [network] protein dimerization activity  (446 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_172107.1 [sequence] [blastp]
NP_973769.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_172107.1)
nucl 10  (predict for NP_973769.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_172107.1)
other 7,  chlo 3  (predict for NP_973769.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G06170
ath-m.4.bio
for
AT1G06170
ath-m.4.hor
for
AT1G06170
ath-m.4.lig
for
AT1G06170
ath-m.4.str
for
AT1G06170
ath-m.4.tis
for
AT1G06170
bra-r.6
for
103867902
bna-r.1
for
106395228
bna-r.1
for
106450080
ghi-r.1
for
107962100
ghi-r.1
for
107900569
ghi-r.1
for
107962098
cit-r.1
for
102627690
ppo-u.5
for
7497650
sly-u.5
for
101251221


Ortholog ID: 2798
Species bna bna ghi ghi ghi cit ppo sly
Symbol LOC106395228 LOC111210772 LOC107900569 LOC107962098 LOC107900568 LOC102627690 LOC7497650 LOC101251221
Function* transcription factor bHLH10-like transcription factor bHLH10 transcription factor bHLH91 transcription factor bHLH91 transcription factor bHLH91 transcription factor bHLH91-like transcription factor bHLH91 transcription factor bHLH91-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly04120 Ubiquitin mediated proteolysis 2
sly04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106395228 111210772 107900569 107962098 107900568 102627690 7497650 101251221
The preparation time of this page was 0.1 [sec].