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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   XTH28   xyloglucan endotransglucosylase/hydrolase 28 
 ath-u.5   XTH28   xyloglucan endotransglucosylase/hydrolase 28 
 ath-r.7   XTH28   xyloglucan endotransglucosylase/hydrolase 28 
 ath-e.2   XTH28   xyloglucan endotransglucosylase/hydrolase 28 
 ath-m.4.bio   XTH28   xyloglucan endotransglucosylase/hydrolase 28 
 ath-m.4.hor   XTH28   xyloglucan endotransglucosylase/hydrolase 28 
 ath-m.4.lig   XTH28   xyloglucan endotransglucosylase/hydrolase 28 
 ath-m.4.str   XTH28   xyloglucan endotransglucosylase/hydrolase 28 
 ath-m.4.tis   XTH28   xyloglucan endotransglucosylase/hydrolase 28 
 ath-u.5   EXGT-A3   endoxyloglucan transferase A3 
 bra-r.6   103854033   probable xyloglucan endotransglucosylase/hydrolase protein 27 
 bra-r.6   103842948   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 bra-r.6   103827547   probable xyloglucan endotransglucosylase/hydrolase protein 27 
 bna-r.1   106348789   probable xyloglucan endotransglucosylase/hydrolase protein 27 
 bna-r.1   111214167   probable xyloglucan endotransglucosylase/hydrolase protein 27 
 bna-r.1   106410734   probable xyloglucan endotransglucosylase/hydrolase protein 27 
 ghi-r.1   107909962   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 ghi-r.1   107920492   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 ghi-r.1   107913525   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 cit-r.1   102616939   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 gma-u.5   100778185   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 gma-u.5   100819680   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 gma-u.5   100817874   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 vvi-u.5   100266368   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 ppo-u.5   7457821   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 ppo-u.5   7462652   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 mtr-u.5   120577442   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 mtr-u.5   25482611   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 sly-u.5   543511   probable xyloglucan endotransglucosylase/hydrolase protein 27 
 sly-u.5   101260851   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 sot-r.1   102599785   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 sot-r.1   102601287   probable xyloglucan endotransglucosylase/hydrolase protein 27 
 nta-r.1   107815234   putative xyloglucan endotransglucosylase/hydrolase protein 27 
 nta-r.1   107809788   putative xyloglucan endotransglucosylase/hydrolase protein 28 
 nta-r.1   107805952   putative xyloglucan endotransglucosylase/hydrolase protein 28 
 osa-u.5   4332198   probable xyloglucan endotransglucosylase/hydrolase protein 27 
 osa-u.5   4346975   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 osa-u.5   4347991   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 zma-u.5   103632715   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 zma-u.5   100382994   uncharacterized LOC100382994 
 tae-r.2   123092826   probable xyloglucan endotransglucosylase/hydrolase protein 27 
 tae-r.2   123121457   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 tae-r.2   123103676   probable xyloglucan endotransglucosylase/hydrolase protein 27 
 hvu-r.1   123395973   probable xyloglucan endotransglucosylase/hydrolase protein 27 
 sbi-r.1   8078869   probable xyloglucan endotransglucosylase/hydrolase protein 27 
 sbi-r.1   8056230   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 bdi-r.1   100842891   probable xyloglucan endotransglucosylase/hydrolase protein 28 
 bdi-r.1   100825072   probable xyloglucan endotransglucosylase/hydrolase protein 27 

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Top 50 coexpressed genes to XTH28 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to XTH28 (ath-m.9 coexpression data)

CoexMap"838037"


athXTH28 | Entrez gene ID : 838037      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 3 1 3 1 2 2 2 2 3 3 2 3 1 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080086 [list] [network] stamen filament development  (14 genes)  IMP  
GO:0010411 [list] [network] xyloglucan metabolic process  (36 genes)  IEA  
GO:0042546 [list] [network] cell wall biogenesis  (199 genes)  IEA  
GO:0010154 [list] [network] fruit development  (807 genes)  IMP  
GO CC
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO MF
GO:0016762 [list] [network] xyloglucan:xyloglucosyl transferase activity  (25 genes)  IEA ISS  
GO:0030247 [list] [network] polysaccharide binding  (96 genes)  ISS  
GO:0004553 [list] [network] hydrolase activity, hydrolyzing O-glycosyl compounds  (292 genes)  IEA  
Protein NP_172925.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  vacu 3,  chlo 1,  mito 1,  plas 1,  extr 1,  E.R. 1,  golg 1,  chlo_mito 1,  golg_plas 1,  E.R._plas 1,  mito_plas 1  (predict for NP_172925.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_172925.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
XTH28
ath-u.5
for
XTH28
ath-r.7
for
XTH28
ath-e.2
for
XTH28
ath-m.4.bio
for
XTH28
ath-m.4.hor
for
XTH28
ath-m.4.lig
for
XTH28
ath-m.4.str
for
XTH28
ath-m.4.tis
for
XTH28
ath-u.5
for
EXGT-A3
bra-r.6
for
103854033
bra-r.6
for
103842948
bra-r.6
for
103827547
bna-r.1
for
106348789
bna-r.1
for
111214167
bna-r.1
for
106410734
ghi-r.1
for
107909962
ghi-r.1
for
107920492
ghi-r.1
for
107913525
cit-r.1
for
102616939
gma-u.5
for
100778185
gma-u.5
for
100819680
gma-u.5
for
100817874
vvi-u.5
for
100266368
ppo-u.5
for
7457821
ppo-u.5
for
7462652
mtr-u.5
for
120577442
mtr-u.5
for
25482611
sly-u.5
for
543511
sly-u.5
for
101260851
sot-r.1
for
102599785
sot-r.1
for
102601287
nta-r.1
for
107815234
nta-r.1
for
107809788
nta-r.1
for
107805952
osa-u.5
for
4332198
osa-u.5
for
4346975
osa-u.5
for
4347991
zma-u.5
for
103632715
zma-u.5
for
100382994
tae-r.2
for
123092826
tae-r.2
for
123121457
tae-r.2
for
123103676
hvu-r.1
for
123395973
sbi-r.1
for
8078869
sbi-r.1
for
8056230
bdi-r.1
for
100842891
bdi-r.1
for
100825072


Ortholog ID: 3296
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa osa zma zma tae tae tae hvu sbi sbi bdi bdi
Symbol XTH28 EXGT-A3 LOC103854033 LOC103842948 LOC103827547 LOC111214167 LOC106431558 LOC106434646 LOC107909962 LOC107920492 LOC107913525 LOC102616939 LOC100778185 LOC100817874 LOC100790136 LOC100266368 LOC7457821 LOC7462652 LOC120577442 LOC25482611 LOC543511 LOC101260851 LOC102599785 LOC102601287 LOC107815234 LOC107805952 LOC107788633 LOC4332198 LOC4346975 LOC4347991 LOC103632715 LOC100382994 LOC123092826 LOC123121457 LOC123098116 LOC123395973 LOC8078869 LOC8056230 LOC100842891 LOC100825072
Function* xyloglucan endotransglucosylase/hydrolase 28 endoxyloglucan transferase A3 probable xyloglucan endotransglucosylase/hydrolase protein 27 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 27 probable xyloglucan endotransglucosylase/hydrolase protein 27 probable xyloglucan endotransglucosylase/hydrolase protein 27 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 27 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 27 putative xyloglucan endotransglucosylase/hydrolase protein 27 putative xyloglucan endotransglucosylase/hydrolase protein 28 putative xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 27 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 28 uncharacterized LOC100382994 probable xyloglucan endotransglucosylase/hydrolase protein 27 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 27 probable xyloglucan endotransglucosylase/hydrolase protein 27 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 28 probable xyloglucan endotransglucosylase/hydrolase protein 27
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
gma01230 Biosynthesis of amino acids 3
gma04814 Motor proteins 2
gma00531 Glycosaminoglycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 4
gma00531 Glycosaminoglycan degradation 2
gma04145 Phagosome 2
gma04517 IgSF CAM signaling 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 2
mtr04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00270 Cysteine and methionine metabolism 2
nta00670 One carbon pool by folate 2
nta04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00270 Cysteine and methionine metabolism 2
nta00670 One carbon pool by folate 2
nta04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 4
sbi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 2
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838037 814716 103854033 103842948 103827547 111214167 106431558 106434646 107909962 107920492 107913525 102616939 100778185 100817874 100790136 100266368 7457821 7462652 120577442 25482611 543511 101260851 102599785 102601287 107815234 107805952 107788633 4332198 4346975 4347991 103632715 100382994 123092826 123121457 123098116 123395973 8078869 8056230 100842891 100825072
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