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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT1G16040   phosphatidylinositol-glycan biosynthesis class F-like protein 
 ath-u.5   AT1G16040   phosphatidylinositol-glycan biosynthesis class F-like protein 
 ath-r.7   AT1G16040   phosphatidylinositol-glycan biosynthesis class F-like protein 
 ath-e.2   AT1G16040   phosphatidylinositol-glycan biosynthesis class F-like protein 
 ath-m.4.bio   AT1G16040   phosphatidylinositol-glycan biosynthesis class F-like protein 
 ath-m.4.hor   AT1G16040   phosphatidylinositol-glycan biosynthesis class F-like protein 
 ath-m.4.lig   AT1G16040   phosphatidylinositol-glycan biosynthesis class F-like protein 
 ath-m.4.str   AT1G16040   phosphatidylinositol-glycan biosynthesis class F-like protein 
 ath-m.4.tis   AT1G16040   phosphatidylinositol-glycan biosynthesis class F-like protein 
 bra-r.6   103842867   phosphatidylinositol-glycan biosynthesis class F protein 
 bra-r.6   103872404   phosphatidylinositol-glycan biosynthesis class F protein 
 bna-r.1   106396611   phosphatidylinositol-glycan biosynthesis class F protein 
 ghi-r.1   107906399   phosphatidylinositol-glycan biosynthesis class F protein 
 cit-r.1   102625326   PIGF/3-ketodihydrosphingosine reductase fusion protein 
 gma-u.5   100784506   phosphatidylinositol-glycan biosynthesis class F protein 
 gma-u.5   100527266   GPI biosynthesis protein family Pig-F 
 vvi-u.5   100854287   uncharacterized LOC100854287 
 ppo-u.5   7493241   uncharacterized LOC7493241 
 mtr-u.5   25490139   phosphatidylinositol-glycan biosynthesis class F protein 
 sly-u.5   101255482   uncharacterized LOC101255482 
 sly-u.5   101255565   uncharacterized LOC101255565 
 sot-r.1   102589397   phosphatidylinositol-glycan biosynthesis class F protein 
 sot-r.1   102585809   phosphatidylinositol-glycan biosynthesis class F protein-like 
 nta-r.1   107789429   uncharacterized LOC107789429 
 nta-r.1   107796664   uncharacterized LOC107796664 
 osa-u.5   4331492   PIGF/3-ketodihydrosphingosine reductase fusion protein 
 zma-u.5   100192727   Phosphatidylinositol-glycan biosynthesis class F protein 
 zma-u.5   100280817   uncharacterized LOC100280817 
 tae-r.2   123098846   phosphatidylinositol-glycan biosynthesis class F protein 
 tae-r.2   123093576   phosphatidylinositol-glycan biosynthesis class F protein 
 tae-r.2   123105784   phosphatidylinositol-glycan biosynthesis class F protein 
 hvu-r.1   123449794   phosphatidylinositol-glycan biosynthesis class F protein 
 sbi-r.1   8085693   phosphatidylinositol-glycan biosynthesis class F protein 
 bdi-r.1   100831174   phosphatidylinositol-glycan biosynthesis class F protein 

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Top 50 coexpressed genes to AT1G16040 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G16040 (ath-m.9 coexpression data)

CoexMap"838175"


athAT1G16040 | Entrez gene ID : 838175      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 1 1 1 2 1 1 1 2 2 2 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00563 [list] [network] Glycosylphosphatidylinositol (GPI)-anchor biosynthesis (29 genes)
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_001320969.1 [sequence] [blastp]
NP_001320970.1 [sequence] [blastp]
NP_001320971.1 [sequence] [blastp]
NP_173056.2 [sequence] [blastp]
Subcellular
localization
wolf
vacu 5,  plas 1,  E.R. 1,  golg 1,  golg_plas 1,  E.R._plas 1  (predict for NP_001320969.1)
vacu 6,  plas 1,  golg 1,  golg_plas 1  (predict for NP_001320970.1)
chlo 4,  extr 3,  E.R. 2,  nucl 1,  vacu 1  (predict for NP_001320971.1)
vacu 6,  plas 2,  extr 1,  golg 1  (predict for NP_173056.2)
Subcellular
localization
TargetP
other 8,  scret 7  (predict for NP_001320969.1)
other 8,  scret 7  (predict for NP_001320970.1)
other 2  (predict for NP_001320971.1)
other 8,  scret 7  (predict for NP_173056.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G16040
ath-u.5
for
AT1G16040
ath-r.7
for
AT1G16040
ath-e.2
for
AT1G16040
ath-m.4.bio
for
AT1G16040
ath-m.4.hor
for
AT1G16040
ath-m.4.lig
for
AT1G16040
ath-m.4.str
for
AT1G16040
ath-m.4.tis
for
AT1G16040
bra-r.6
for
103842867
bra-r.6
for
103872404
bna-r.1
for
106396611
ghi-r.1
for
107906399
cit-r.1
for
102625326
gma-u.5
for
100784506
gma-u.5
for
100527266
vvi-u.5
for
100854287
ppo-u.5
for
7493241
mtr-u.5
for
25490139
sly-u.5
for
101255482
sly-u.5
for
101255565
sot-r.1
for
102589397
sot-r.1
for
102585809
nta-r.1
for
107789429
nta-r.1
for
107796664
osa-u.5
for
4331492
zma-u.5
for
100192727
zma-u.5
for
100280817
tae-r.2
for
123098846
tae-r.2
for
123093576
tae-r.2
for
123105784
hvu-r.1
for
123449794
sbi-r.1
for
8085693
bdi-r.1
for
100831174


Ortholog ID: 6701
Species ath bra bra ghi cit gma gma vvi ppo mtr sly sly sot sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol AT1G16040 LOC103842867 LOC103872404 LOC107906399 LOC102625326 LOC100784506 LOC100527266 LOC100854287 LOC7493241 LOC25490139 LOC101255482 LOC101255565 LOC102589397 LOC102585809 LOC107789429 LOC107796664 LOC4331492 LOC100192727 LOC100280817 LOC123098846 LOC123093576 LOC123105784 LOC123449794 LOC8085693 LOC100831174
Function* phosphatidylinositol-glycan biosynthesis class F-like protein phosphatidylinositol-glycan biosynthesis class F protein phosphatidylinositol-glycan biosynthesis class F protein phosphatidylinositol-glycan biosynthesis class F protein PIGF/3-ketodihydrosphingosine reductase fusion protein phosphatidylinositol-glycan biosynthesis class F protein GPI biosynthesis protein family Pig-F uncharacterized LOC100854287 uncharacterized LOC7493241 phosphatidylinositol-glycan biosynthesis class F protein uncharacterized LOC101255482 uncharacterized LOC101255565 phosphatidylinositol-glycan biosynthesis class F protein phosphatidylinositol-glycan biosynthesis class F protein-like uncharacterized LOC107789429 uncharacterized LOC107796664 PIGF/3-ketodihydrosphingosine reductase fusion protein Phosphatidylinositol-glycan biosynthesis class F protein uncharacterized LOC100280817 phosphatidylinositol-glycan biosynthesis class F protein phosphatidylinositol-glycan biosynthesis class F protein phosphatidylinositol-glycan biosynthesis class F protein phosphatidylinositol-glycan biosynthesis class F protein phosphatidylinositol-glycan biosynthesis class F protein phosphatidylinositol-glycan biosynthesis class F protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00350 Tyrosine metabolism 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 5
gma03040 Spliceosome 4
gma04130 SNARE interactions in vesicular transport 2
gma03015 mRNA surveillance pathway 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma04130 SNARE interactions in vesicular transport 2
gma04120 Ubiquitin mediated proteolysis 2
gma03018 RNA degradation 2
gma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi04145 Phagosome 2
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo03018 RNA degradation 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 4
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 4
sot00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 2
osa00510 N-Glycan biosynthesis 2
osa00513 Various types of N-glycan biosynthesis 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838175 103842867 103872404 107906399 102625326 100784506 100527266 100854287 7493241 25490139 101255482 101255565 102589397 102585809 107789429 107796664 4331492 100192727 100280817 123098846 123093576 123105784 123449794 8085693 100831174
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