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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT1G16740   Ribosomal protein L20 
 ath-u.5   AT1G16740   Ribosomal protein L20 
 ath-r.7   AT1G16740   Ribosomal protein L20 
 ath-e.2   AT1G16740   Ribosomal protein L20 
 ath-m.4.bio   AT1G16740   Ribosomal protein L20 
 ath-m.4.hor   AT1G16740   Ribosomal protein L20 
 ath-m.4.lig   AT1G16740   Ribosomal protein L20 
 ath-m.4.str   AT1G16740   Ribosomal protein L20 
 ath-m.4.tis   AT1G16740   Ribosomal protein L20 
 bra-r.6   103872462   50S ribosomal protein L20 
 bra-r.6   103835988   50S ribosomal protein L20 
 bna-r.1   106365584   50S ribosomal protein L20-like 
 bna-r.1   106387593   50S ribosomal protein L20-like 
 bna-r.1   106415011   50S ribosomal protein L20-like 
 ghi-r.1   107951719   50S ribosomal protein L20 
 ghi-r.1   107936759   50S ribosomal protein L20 
 cit-r.1   102623378   uncharacterized LOC102623378 
 gma-u.5   100527387   ribosomal protein L20 
 vvi-u.5   100263906   50S ribosomal protein L20-like 
 ppo-u.5   18099447   uncharacterized LOC18099447 
 mtr-u.5   11432309   50S ribosomal protein L20 
 mtr-u.5   25479775   50S ribosomal protein L20 
 sly-u.5   101261574   ribosomal protein L20 
 sot-r.1   102601170   50S ribosomal protein L20 
 nta-r.1   107807860   uncharacterized LOC107807860 
 nta-r.1   107789461   uncharacterized LOC107789461 
 nta-r.1   142179309   uncharacterized LOC142179309 
 osa-u.5   4339398   uncharacterized LOC4339398 
 zma-u.5   100280565   50S ribosomal protein L20-like 
 tae-r.2   123063891   50S ribosomal protein L20 
 tae-r.2   123058533   50S ribosomal protein L20 
 tae-r.2   123065627   50S ribosomal protein L20 
 hvu-r.1   123440214   50S ribosomal protein L20-like 
 hvu-r.1   123448883   50S ribosomal protein L20-like 
 sbi-r.1   8062138   50S ribosomal protein L20 
 sbi-r.1   8068962   50S ribosomal protein L20 
 bdi-r.1   100843048   50S ribosomal protein L20 
 bdi-r.1   100841435   50S ribosomal protein L20 
 cre-r.1   CHLRE_01g052350v5   uncharacterized protein 

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Top 50 coexpressed genes to AT1G16740 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G16740 (ath-m.9 coexpression data)

CoexMap"838245"


athAT1G16740 | Entrez gene ID : 838245    
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 1 1 1 2 1 1 3 1 1 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0006412 [list] [network] translation  (926 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (75 genes)  IEA  
Protein NP_173118.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  cyto 3,  chlo 2  (predict for NP_173118.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for NP_173118.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G16740
ath-u.5
for
AT1G16740
ath-r.7
for
AT1G16740
ath-e.2
for
AT1G16740
ath-m.4.bio
for
AT1G16740
ath-m.4.hor
for
AT1G16740
ath-m.4.lig
for
AT1G16740
ath-m.4.str
for
AT1G16740
ath-m.4.tis
for
AT1G16740
bra-r.6
for
103872462
bra-r.6
for
103835988
bna-r.1
for
106365584
bna-r.1
for
106387593
bna-r.1
for
106415011
ghi-r.1
for
107951719
ghi-r.1
for
107936759
cit-r.1
for
102623378
gma-u.5
for
100527387
vvi-u.5
for
100263906
ppo-u.5
for
18099447
mtr-u.5
for
11432309
mtr-u.5
for
25479775
sly-u.5
for
101261574
sot-r.1
for
102601170
nta-r.1
for
107807860
nta-r.1
for
107789461
nta-r.1
for
142179309
osa-u.5
for
4339398
zma-u.5
for
100280565
tae-r.2
for
123063891
tae-r.2
for
123058533
tae-r.2
for
123065627
hvu-r.1
for
123440214
hvu-r.1
for
123448883
sbi-r.1
for
8062138
sbi-r.1
for
8068962
bdi-r.1
for
100843048
bdi-r.1
for
100841435
cre-r.1
for
CHLRE_01g052350v5


Ortholog ID: 5617
Species ath bra bra bna bna bna ghi ghi cit gma vvi ppo mtr mtr sly sot nta nta nta osa zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol AT1G16740 LOC103872462 LOC103835988 LOC106365584 LOC106387593 LOC106415011 LOC107951719 LOC107936759 LOC102623378 LOC100527387 LOC100263906 LOC18099447 LOC11432309 LOC25479775 LOC101261574 LOC102601170 LOC107807860 LOC107789461 LOC142179309 LOC4339398 LOC100280565 LOC123063891 LOC123058533 LOC123065627 LOC123440214 LOC123448883 LOC8062138 LOC8068962 LOC100843048 LOC100841435 CHLRE_01g052350v5
Function* Ribosomal protein L20 50S ribosomal protein L20 50S ribosomal protein L20 50S ribosomal protein L20-like 50S ribosomal protein L20-like 50S ribosomal protein L20-like 50S ribosomal protein L20 50S ribosomal protein L20 uncharacterized LOC102623378 ribosomal protein L20 50S ribosomal protein L20-like uncharacterized LOC18099447 50S ribosomal protein L20 50S ribosomal protein L20 ribosomal protein L20 50S ribosomal protein L20 uncharacterized LOC107807860 uncharacterized LOC107789461 uncharacterized LOC142179309 uncharacterized LOC4339398 50S ribosomal protein L20-like 50S ribosomal protein L20 50S ribosomal protein L20 50S ribosomal protein L20 50S ribosomal protein L20-like 50S ribosomal protein L20-like 50S ribosomal protein L20 50S ribosomal protein L20 50S ribosomal protein L20 50S ribosomal protein L20 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 9
bra03040 Spliceosome 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 9
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
sly00190 Oxidative phosphorylation 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 3
sot03420 Nucleotide excision repair 3
sot03010 Ribosome 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03008 Ribosome biogenesis in eukaryotes 4
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta00240 Pyrimidine metabolism 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
tae03040 Spliceosome 6
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
tae03020 RNA polymerase 2
tae00790 Folate biosynthesis 2
tae01240 Biosynthesis of cofactors 2
tae04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 4
sbi00010 Glycolysis / Gluconeogenesis 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 4
cre04145 Phagosome 4
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838245 103872462 103835988 106365584 106387593 106415011 107951719 107936759 102623378 100527387 100263906 18099447 11432309 25479775 101261574 102601170 107807860 107789461 142179309 4339398 100280565 123063891 123058533 123065627 123440214 123448883 8062138 8068962 100843048 100841435 5715777
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