Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9  AT1G20180  transmembrane protein (DUF677) 
 ath-m.4.bio  AT1G20180  transmembrane protein (DUF677) 
 ath-m.4.hor  AT1G20180  transmembrane protein (DUF677) 
 ath-m.4.lig  AT1G20180  transmembrane protein (DUF677) 
 ath-m.4.str  AT1G20180  transmembrane protein (DUF677) 
 ath-m.4.tis  AT1G20180  transmembrane protein (DUF677) 
 ghi-r.1  107961301  UPF0496 protein At1g20180 
 vvi-u.5  100248892  UPF0496 protein At1g20180 
 mtr-u.5  11439914  UPF0496 protein At1g20180 
 mtr-u.5  25501417  UPF0496 protein At1g20180 
 mtr-u.5  11420426  UPF0496 protein At1g20180 
 sly-u.5  101245054  uncharacterized LOC101245054 
 sot-r.1  102605480  UPF0496 protein At1g20180-like 
 zma-u.5  103648660  putative UPF0496 protein 2 

close


Top 50 coexpressed genes to AT1G20180 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT1G20180 (ath-m.9 coexpression data)

CoexMap"838607"


athAT1G20180 | Entrez gene ID : 838607
Species ath ghi vvi mtr sly sot zma cre bra ppo hvu nta bna tae bdi osa gma cit sbi
Paralog 6 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_001077567.1 [sequence] [blastp]
NP_173445.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 1,  golg 1,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_001077567.1)
nucl 6,  chlo 1,  mito 1,  golg 1,  chlo_mito 1  (predict for NP_173445.2)
Subcellular
localization
TargetP
other 3,  mito 3  (predict for NP_001077567.1)
other 3,  mito 3  (predict for NP_173445.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G20180


ath-m.4.bio
for
AT1G20180


ath-m.4.hor
for
AT1G20180


ath-m.4.lig
for
AT1G20180


ath-m.4.str
for
AT1G20180


ath-m.4.tis
for
AT1G20180


ghi-r.1
for
107961301


vvi-u.5
for
100248892


mtr-u.5
for
11439914


mtr-u.5
for
25501417


mtr-u.5
for
11420426


sly-u.5
for
101245054


sot-r.1
for
102605480


zma-u.5
for
103648660



Ortholog ID: 3863
Species vvi mtr mtr mtr sly sot zma
Symbol LOC100248892 LOC11439914 LOC25501417 LOC11420426 LOC101245054 LOC102605480 LOC103648660
Function* UPF0496 protein At1g20180 UPF0496 protein At1g20180 UPF0496 protein At1g20180 UPF0496 protein At1g20180 uncharacterized LOC101245054 UPF0496 protein At1g20180-like putative UPF0496 protein 2
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 2
mtr00564 Glycerophospholipid metabolism 2
mtr00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03083 Polycomb repressive complex 2
sot00860 Porphyrin metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100248892 11439914 25501417 11420426 101245054 102605480 103648660
The preparation time of this page was 0.1 [sec].