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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   HCAR   coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family 
 ath-u.5   HCAR   coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family 
 ath-r.7   HCAR   coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family 
 ath-e.2   HCAR   coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family 
 ath-m.4.bio   HCAR   coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family 
 ath-m.4.hor   HCAR   coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family 
 ath-m.4.lig   HCAR   coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family 
 ath-m.4.str   HCAR   coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family 
 ath-m.4.tis   HCAR   coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family 
 bra-r.6   103844235   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 bna-r.1   106370995   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 bna-r.1   106400941   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 ghi-r.1   107915002   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 ghi-r.1   107924239   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 cit-r.1   102624855   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 gma-u.5   100791244   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 vvi-u.5   100254621   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 ppo-u.5   7477016   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 mtr-u.5   25483044   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 sly-u.5   101248918   coenzyme F420 hydrogenase_dehydrogenase beta subunit-like 
 sot-r.1   102587437   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 nta-r.1   107815010   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 nta-r.1   107811457   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 osa-u.5   4335472   7-hydroxymethyl chlorophyll a reductase, chloroplastic-like 
 zma-u.5   100192754   7-hydroxymethyl chlorophyll a reductase chloroplastic 
 tae-r.2   123130847   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 tae-r.2   123054126   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 tae-r.2   123181851   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 hvu-r.1   123399523   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 sbi-r.1   8054816   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 bdi-r.1   100841555   7-hydroxymethyl chlorophyll a reductase, chloroplastic 
 cre-r.1   CHLRE_11g468700v5   uncharacterized protein 

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Top 50 coexpressed genes to HCAR (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to HCAR (ath-m.9 coexpression data)

CoexMap"839472"


athHCAR | Entrez gene ID : 839472      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00860 [list] [network] Porphyrin metabolism (57 genes)
GO BP
GO:0033354 [list] [network] chlorophyll cycle  (1 genes)  IDA  
GO:0015994 [list] [network] chlorophyll metabolic process  (47 genes)  IDA  
GO CC
GO:0005576 [list] [network] extracellular region  (3158 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA ISM  
GO MF
GO:0090415 [list] [network] 7-hydroxymethyl chlorophyll a reductase activity  (1 genes)  IDA  
Protein NP_171956.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  vacu 2,  chlo_mito 2,  nucl 1,  mito 1,  E.R._vacu 1  (predict for NP_171956.2)
Subcellular
localization
TargetP
chlo 7  (predict for NP_171956.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
HCAR
ath-u.5
for
HCAR
ath-r.7
for
HCAR
ath-e.2
for
HCAR
ath-m.4.bio
for
HCAR
ath-m.4.hor
for
HCAR
ath-m.4.lig
for
HCAR
ath-m.4.str
for
HCAR
ath-m.4.tis
for
HCAR
bra-r.6
for
103844235
bna-r.1
for
106370995
bna-r.1
for
106400941
ghi-r.1
for
107915002
ghi-r.1
for
107924239
cit-r.1
for
102624855
gma-u.5
for
100791244
vvi-u.5
for
100254621
ppo-u.5
for
7477016
mtr-u.5
for
25483044
sly-u.5
for
101248918
sot-r.1
for
102587437
nta-r.1
for
107815010
nta-r.1
for
107811457
osa-u.5
for
4335472
zma-u.5
for
100192754
tae-r.2
for
123130847
tae-r.2
for
123054126
tae-r.2
for
123181851
hvu-r.1
for
123399523
sbi-r.1
for
8054816
bdi-r.1
for
100841555
cre-r.1
for
CHLRE_11g468700v5


Ortholog ID: 10484
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol HCAR LOC103844235 LOC106370995 LOC106400941 LOC107915002 LOC107924239 LOC102624855 LOC100791244 LOC100254621 LOC7477016 LOC25483044 LOC101248918 LOC102587437 LOC107815010 LOC107811457 LOC4335472 LOC100192754 LOC123130847 LOC123054126 LOC123181851 LOC123399523 LOC8054816 LOC100841555 CHLRE_11g468700v5
Function* coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family 7-hydroxymethyl chlorophyll a reductase, chloroplastic 7-hydroxymethyl chlorophyll a reductase, chloroplastic 7-hydroxymethyl chlorophyll a reductase, chloroplastic 7-hydroxymethyl chlorophyll a reductase, chloroplastic 7-hydroxymethyl chlorophyll a reductase, chloroplastic 7-hydroxymethyl chlorophyll a reductase, chloroplastic 7-hydroxymethyl chlorophyll a reductase, chloroplastic 7-hydroxymethyl chlorophyll a reductase, chloroplastic 7-hydroxymethyl chlorophyll a reductase, chloroplastic 7-hydroxymethyl chlorophyll a reductase, chloroplastic coenzyme F420 hydrogenase_dehydrogenase beta subunit-like 7-hydroxymethyl chlorophyll a reductase, chloroplastic 7-hydroxymethyl chlorophyll a reductase, chloroplastic 7-hydroxymethyl chlorophyll a reductase, chloroplastic 7-hydroxymethyl chlorophyll a reductase, chloroplastic-like 7-hydroxymethyl chlorophyll a reductase chloroplastic 7-hydroxymethyl chlorophyll a reductase, chloroplastic 7-hydroxymethyl chlorophyll a reductase, chloroplastic 7-hydroxymethyl chlorophyll a reductase, chloroplastic 7-hydroxymethyl chlorophyll a reductase, chloroplastic 7-hydroxymethyl chlorophyll a reductase, chloroplastic 7-hydroxymethyl chlorophyll a reductase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 3
ath00730 Thiamine metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00340 Histidine metabolism 2
bna01230 Biosynthesis of amino acids 2
bna00500 Starch and sucrose metabolism 2
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 6
ghi00860 Porphyrin metabolism 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 6
ghi00860 Porphyrin metabolism 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 6
tae00010 Glycolysis / Gluconeogenesis 5
tae00860 Porphyrin metabolism 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 4
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 6
tae00010 Glycolysis / Gluconeogenesis 5
tae00860 Porphyrin metabolism 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00620 Pyruvate metabolism 3
cre01200 Carbon metabolism 3
cre00860 Porphyrin metabolism 2
cre00010 Glycolysis / Gluconeogenesis 2
cre00020 Citrate cycle (TCA cycle) 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839472 103844235 106370995 106400941 107915002 107924239 102624855 100791244 100254621 7477016 25483044 101248918 102587437 107815010 107811457 4335472 100192754 123130847 123054126 123181851 123399523 8054816 100841555 5725053
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