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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT1G04360   RING/U-box superfamily protein 
 ath-u.5   AT1G04360   RING/U-box superfamily protein 
 ath-r.7   AT1G04360   RING/U-box superfamily protein 
 ath-e.2   AT1G04360   RING/U-box superfamily protein 
 ath-m.4.bio   AT1G04360   RING/U-box superfamily protein 
 ath-m.4.hor   AT1G04360   RING/U-box superfamily protein 
 ath-m.4.lig   AT1G04360   RING/U-box superfamily protein 
 ath-m.4.str   AT1G04360   RING/U-box superfamily protein 
 ath-m.4.tis   AT1G04360   RING/U-box superfamily protein 
 ath-u.5   AT5G43420   RING/U-box superfamily protein 
 vvi-u.5   100249451   RING-H2 finger protein ATL16 
 ppo-u.5   7456544   RING-H2 finger protein ATL16 
 ppo-u.5   7471976   RING-H2 finger protein ATL16 
 mtr-u.5   25499242   RING-H2 finger protein ATL16 
 mtr-u.5   25484424   RING-H2 finger protein ATL16 
 sly-u.5   101249928   RING-H2 finger protein ATL16-like 
 sly-u.5   101248916   RING-H2 finger protein ATL16 
 osa-u.5   9268438   RING-H2 finger protein ATL16 
 osa-u.5   4331167   RING-H2 finger protein ATL1 
 zma-u.5   100273252   putative RING zinc finger domain superfamily protein 
 zma-u.5   113687189   uncharacterized LOC113687189 
 zma-u.5   100382345   putative RING zinc finger domain superfamily protein 

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Top 50 coexpressed genes to AT1G04360 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G04360 (ath-m.9 coexpression data)

CoexMap"839540"


athAT1G04360 | Entrez gene ID : 839540      
Species ath vvi ppo mtr sly osa zma hvu bna cit bra ghi sbi bdi nta gma tae cre sot
Paralog 10 1 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_171931.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  extr 2,  nucl_plas 2,  chlo 1,  plas 1,  vacu 1,  cyto_nucl 1,  cysk_nucl 1  (predict for NP_171931.1)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for NP_171931.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G04360
ath-u.5
for
AT1G04360
ath-r.7
for
AT1G04360
ath-e.2
for
AT1G04360
ath-m.4.bio
for
AT1G04360
ath-m.4.hor
for
AT1G04360
ath-m.4.lig
for
AT1G04360
ath-m.4.str
for
AT1G04360
ath-m.4.tis
for
AT1G04360
ath-u.5
for
AT5G43420
vvi-u.5
for
100249451
ppo-u.5
for
7456544
ppo-u.5
for
7471976
mtr-u.5
for
25499242
mtr-u.5
for
25484424
sly-u.5
for
101249928
sly-u.5
for
101248916
osa-u.5
for
9268438
osa-u.5
for
4331167
zma-u.5
for
100273252
zma-u.5
for
113687189
zma-u.5
for
100382345


Ortholog ID: 1816
Species ath ath bra ghi cit cit vvi ppo mtr sly sly sot sot osa zma zma bdi
Symbol AT5G43420 AT1G04360 LOC103827972 LOC121227840 LOC102619218 LOC102612313 LOC100249451 LOC7456544 LOC25499242 LOC101249928 LOC101248916 LOC102593598 LOC102594011 LOC4331167 LOC100273252 LOC100382345 LOC100836221
Function* RING/U-box superfamily protein RING/U-box superfamily protein RING-H2 finger protein ATL16 RING-H2 finger protein ATL16 RING-H2 finger protein ATL16 RING-H2 finger protein ATL16 RING-H2 finger protein ATL16 RING-H2 finger protein ATL16 RING-H2 finger protein ATL16 RING-H2 finger protein ATL16-like RING-H2 finger protein ATL16 RING-H2 finger protein ATL16 RING-H2 finger protein ATL16 RING-H2 finger protein ATL1 putative RING zinc finger domain superfamily protein putative RING zinc finger domain superfamily protein RING-H2 finger protein ATL16
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 3
sot00040 Pentose and glucuronate interconversions 2
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sot00941 Flavonoid biosynthesis 2
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00062 Fatty acid elongation 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00073 Cutin, suberine and wax biosynthesis 4
zma00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834362 839540 103827972 121227840 102619218 102612313 100249451 7456544 25499242 101249928 101248916 102593598 102594011 4331167 100273252 100382345 100836221
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