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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT1G27930   glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 
 ath-u.5   AT1G27930   glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 
 ath-r.7   AT1G27930   glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 
 ath-e.2   AT1G27930   glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 
 ath-m.4.bio   AT1G27930   glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 
 ath-m.4.hor   AT1G27930   glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 
 ath-m.4.lig   AT1G27930   glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 
 ath-m.4.str   AT1G27930   glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 
 ath-m.4.tis   AT1G27930   glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 
 bra-r.6   103829041   probable methyltransferase At1g27930 
 bra-r.6   103831033   probable methyltransferase At1g27930 
 bra-r.6   103839009   probable methyltransferase At1g27930 
 bna-r.1   106367302   probable methyltransferase At1g27930 
 bna-r.1   106374327   probable methyltransferase At1g27930 
 bna-r.1   106409865   probable methyltransferase At1g27930 
 ghi-r.1   107909846   probable methyltransferase At1g27930 
 ghi-r.1   121224174   probable methyltransferase At1g27930 
 ghi-r.1   107946266   probable methyltransferase At1g27930 
 cit-r.1   102609885   probable methyltransferase At1g27930 
 gma-u.5   100789499   probable methyltransferase At1g27930 
 gma-u.5   100786348   probable methyltransferase At1g27930 
 vvi-u.5   100265182   arabinogalactan O-methyltransferase 1 
 vvi-u.5   100253955   arabinogalactan O-methyltransferase 1 
 ppo-u.5   7460546   probable methyltransferase At1g27930 
 ppo-u.5   7496574   probable methyltransferase At1g27930 
 mtr-u.5   11441060   probable methyltransferase At1g27930 
 sot-r.1   102593691   probable methyltransferase At1g27930 
 sot-r.1   102594016   probable methyltransferase At1g27930 
 nta-r.1   107807561   arabinogalactan O-methyltransferase 1-like 
 osa-u.5   4350540   arabinogalactan O-methyltransferase 1 
 zma-u.5   100284801   plant-specific domain TIGR01627 family protein 
 tae-r.2   123072513   probable methyltransferase At1g27930 
 tae-r.2   123080733   probable methyltransferase At1g27930 
 tae-r.2   123185752   probable methyltransferase At1g27930 
 hvu-r.1   123440952   probable methyltransferase At1g27930 
 hvu-r.1   123430539   probable methyltransferase At1g27930 
 sbi-r.1   8075801   probable methyltransferase At1g27930 
 bdi-r.1   100846436   probable methyltransferase At1g27930 

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Top 50 coexpressed genes to AT1G27930 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G27930 (ath-m.9 coexpression data)

CoexMap"839686"


athAT1G27930 | Entrez gene ID : 839686      
Species ath bra bna ghi cit gma vvi ppo mtr sot nta osa zma tae hvu sbi bdi cre sly
Paralog 9 3 3 3 1 2 2 2 1 2 1 1 1 3 2 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006479 [list] [network] protein methylation  (12 genes)  IMP  
GO:0009827 [list] [network] plant-type cell wall modification  (68 genes)  IMP  
GO CC
GO:0005797 [list] [network] Golgi medial cisterna  (58 genes)  HDA  
GO:0005802 [list] [network] trans-Golgi network  (279 genes)  HDA  
GO:0005768 [list] [network] endosome  (359 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  HDA IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO MF
GO:0030775 [list] [network] glucuronoxylan 4-O-methyltransferase activity  (5 genes)  IMP  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_564297.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  cyto 1,  vacu 1,  E.R. 1,  pero 1,  E.R._vacu 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_564297.1)
Subcellular
localization
TargetP
scret 7  (predict for NP_564297.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G27930
ath-u.5
for
AT1G27930
ath-r.7
for
AT1G27930
ath-e.2
for
AT1G27930
ath-m.4.bio
for
AT1G27930
ath-m.4.hor
for
AT1G27930
ath-m.4.lig
for
AT1G27930
ath-m.4.str
for
AT1G27930
ath-m.4.tis
for
AT1G27930
bra-r.6
for
103829041
bra-r.6
for
103831033
bra-r.6
for
103839009
bna-r.1
for
106367302
bna-r.1
for
106374327
bna-r.1
for
106409865
ghi-r.1
for
107909846
ghi-r.1
for
121224174
ghi-r.1
for
107946266
cit-r.1
for
102609885
gma-u.5
for
100789499
gma-u.5
for
100786348
vvi-u.5
for
100265182
vvi-u.5
for
100253955
ppo-u.5
for
7460546
ppo-u.5
for
7496574
mtr-u.5
for
11441060
sot-r.1
for
102593691
sot-r.1
for
102594016
nta-r.1
for
107807561
osa-u.5
for
4350540
zma-u.5
for
100284801
tae-r.2
for
123072513
tae-r.2
for
123080733
tae-r.2
for
123185752
hvu-r.1
for
123440952
hvu-r.1
for
123430539
sbi-r.1
for
8075801
bdi-r.1
for
100846436


Ortholog ID: 2681
Species ath bra bra bra bna bna bna ghi ghi ghi cit gma vvi vvi ppo ppo mtr mtr sot sot nta nta osa zma tae tae tae hvu hvu sbi bdi
Symbol AT1G27930 LOC103829041 LOC103839009 LOC103852393 LOC106367302 LOC106358042 LOC106411270 LOC107946266 LOC107933342 LOC107917601 LOC102609885 LOC100820087 LOC100265182 LOC100253955 LOC7460546 LOC7496574 LOC11441060 LOC25501752 LOC102593691 LOC102594016 LOC107807561 LOC107818844 LOC4350540 LOC100284801 LOC123072513 LOC123080733 LOC123185752 LOC123440952 LOC123430539 LOC8075801 LOC100846436
Function* glucuronoxylan 4-O-methyltransferase-like protein (DUF579) probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 arabinogalactan O-methyltransferase 1 arabinogalactan O-methyltransferase 1 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 arabinogalactan O-methyltransferase 1-like arabinogalactan O-methyltransferase 1-like arabinogalactan O-methyltransferase 1 plant-specific domain TIGR01627 family protein probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 4
bra00510 N-Glycan biosynthesis 2
bra00513 Various types of N-glycan biosynthesis 2
bra03060 Protein export 2
bra04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00240 Pyrimidine metabolism 2
bra00410 beta-Alanine metabolism 2
bra00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00670 One carbon pool by folate 3
vvi01200 Carbon metabolism 3
vvi00999 Biosynthesis of various plant secondary metabolites 3
vvi00260 Glycine, serine and threonine metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00670 One carbon pool by folate 6
mtr01230 Biosynthesis of amino acids 6
mtr01240 Biosynthesis of cofactors 6
mtr00270 Cysteine and methionine metabolism 6
mtr00541 Biosynthesis of various nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 2
sot03450 Non-homologous end-joining 2
sot00240 Pyrimidine metabolism 2
sot01232 Nucleotide metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 2
sot03450 Non-homologous end-joining 2
sot00240 Pyrimidine metabolism 2
sot01232 Nucleotide metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 8
nta04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 6
nta04075 Plant hormone signal transduction 3
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04145 Phagosome 3
tae04517 IgSF CAM signaling 3
tae04814 Motor proteins 3
tae00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04145 Phagosome 6
tae04517 IgSF CAM signaling 6
tae04814 Motor proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 5
sbi04075 Plant hormone signal transduction 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839686 103829041 103839009 103852393 106367302 106358042 106411270 107946266 107933342 107917601 102609885 100820087 100265182 100253955 7460546 7496574 11441060 25501752 102593691 102594016 107807561 107818844 4350540 100284801 123072513 123080733 123185752 123440952 123430539 8075801 100846436
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