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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   SYP61   syntaxin of plants 61 
 ath-u.5   SYP61   syntaxin of plants 61 
 ath-r.7   SYP61   syntaxin of plants 61 
 ath-e.2   SYP61   syntaxin of plants 61 
 ath-m.4.bio   SYP61   syntaxin of plants 61 
 ath-m.4.hor   SYP61   syntaxin of plants 61 
 ath-m.4.lig   SYP61   syntaxin of plants 61 
 ath-m.4.str   SYP61   syntaxin of plants 61 
 ath-m.4.tis   SYP61   syntaxin of plants 61 
 bra-r.6   103829004   syntaxin-61 
 bra-r.6   103835316   syntaxin-61 
 bra-r.6   103838947   syntaxin-61 
 bna-r.1   106361683   syntaxin-61 
 bna-r.1   106358061   syntaxin-61 
 bna-r.1   106389637   syntaxin-61-like 
 ghi-r.1   107935685   syntaxin-61 
 ghi-r.1   107924894   syntaxin-61 
 ghi-r.1   107917502   syntaxin-61 
 cit-r.1   102621665   syntaxin-61 
 gma-u.5   100795447   syntaxin-61-like 
 gma-u.5   100793612   syntaxin-61 
 gma-u.5   100790368   syntaxin-61 
 vvi-u.5   100257700   syntaxin-61 
 ppo-u.5   18103087   syntaxin-61 
 ppo-u.5   7476368   syntaxin-61 
 mtr-u.5   11421724   syntaxin-61 
 mtr-u.5   11429985   syntaxin-61 
 sly-u.5   101246033   syntaxin-61 
 sot-r.1   102593749   syntaxin-61 
 nta-r.1   107763439   syntaxin-61 
 nta-r.1   107780444   syntaxin-61 
 osa-u.5   4324558   syntaxin-61 
 zma-u.5   103639462   syntaxin-61 
 zma-u.5   100273880   uncharacterized LOC100273880 
 tae-r.2   123063561   syntaxin-61 
 tae-r.2   123096411   syntaxin-61 
 tae-r.2   123094615   syntaxin-61 
 hvu-r.1   123445611   syntaxin-61-like 
 hvu-r.1   123447984   syntaxin-61-like 
 sbi-r.1   8077409   syntaxin-61 
 bdi-r.1   100843714   60S ribosomal protein L3 
 bdi-r.1   100824893   syntaxin-61 
 cre-r.1   CHLRE_06g290100v5   uncharacterized protein 

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Top 50 coexpressed genes to SYP61 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SYP61 (ath-m.9 coexpression data)

CoexMap"839749"


athSYP61 | Entrez gene ID : 839749      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 3 3 3 1 3 1 2 2 1 1 2 1 2 3 2 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04130 [list] [network] SNARE interactions in vesicular transport (55 genes)
GO BP
GO:0006887 [list] [network] exocytosis  (6 genes)  IDA  
GO:0006906 [list] [network] vesicle fusion  (9 genes)  IDA  
GO:0052324 [list] [network] plant-type cell wall cellulose biosynthetic process  (10 genes)  IDA  
GO:0006886 [list] [network] intracellular protein transport  (149 genes)  IDA  
GO CC
GO:0031201 [list] [network] SNARE complex  (8 genes)  IDA  
GO:0032588 [list] [network] trans-Golgi network membrane  (16 genes)  IDA  
GO:0005802 [list] [network] trans-Golgi network  (279 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  ISM  
GO MF
GO:0005484 [list] [network] SNAP receptor activity  (30 genes)  TAS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001031102.2 [sequence] [blastp]
NP_001321010.1 [sequence] [blastp]
NP_564310.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  plas 2,  golg 2,  golg_plas 2,  cyto 1,  pero 1,  nucl_plas 1,  cyto_pero 1  (predict for NP_001031102.2)
nucl 2,  cyto 2,  vacu 2,  golg 2,  cyto_nucl 2  (predict for NP_001321010.1)
golg 4,  vacu 3,  cyto 2,  golg_plas 2  (predict for NP_564310.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for NP_001031102.2)
other 8  (predict for NP_001321010.1)
other 9  (predict for NP_564310.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
SYP61
ath-u.5
for
SYP61
ath-r.7
for
SYP61
ath-e.2
for
SYP61
ath-m.4.bio
for
SYP61
ath-m.4.hor
for
SYP61
ath-m.4.lig
for
SYP61
ath-m.4.str
for
SYP61
ath-m.4.tis
for
SYP61
bra-r.6
for
103829004
bra-r.6
for
103835316
bra-r.6
for
103838947
bna-r.1
for
106361683
bna-r.1
for
106358061
bna-r.1
for
106389637
ghi-r.1
for
107935685
ghi-r.1
for
107924894
ghi-r.1
for
107917502
cit-r.1
for
102621665
gma-u.5
for
100795447
gma-u.5
for
100793612
gma-u.5
for
100790368
vvi-u.5
for
100257700
ppo-u.5
for
18103087
ppo-u.5
for
7476368
mtr-u.5
for
11421724
mtr-u.5
for
11429985
sly-u.5
for
101246033
sot-r.1
for
102593749
nta-r.1
for
107763439
nta-r.1
for
107780444
osa-u.5
for
4324558
zma-u.5
for
103639462
zma-u.5
for
100273880
tae-r.2
for
123063561
tae-r.2
for
123096411
tae-r.2
for
123094615
hvu-r.1
for
123445611
hvu-r.1
for
123447984
sbi-r.1
for
8077409
bdi-r.1
for
100843714
bdi-r.1
for
100824893
cre-r.1
for
CHLRE_06g290100v5


Ortholog ID: 3522
Species ath bra bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma zma tae tae tae hvu hvu sbi bdi bdi cre
Symbol SYP61 LOC103829004 LOC103835316 LOC103838947 LOC106358061 LOC106435091 LOC106439199 LOC107891772 LOC107889017 LOC107941730 LOC102621665 LOC100795447 LOC100793612 LOC100790368 LOC100257700 LOC18103087 LOC7476368 LOC11421724 LOC11429985 LOC101246033 LOC102593749 LOC107763439 LOC107780444 LOC4324558 LOC103639462 LOC100273880 LOC123063561 LOC123094615 LOC123063563 LOC123445611 LOC123447984 LOC8077409 LOC100843714 LOC100824893 CHLRE_06g290100v5
Function* syntaxin of plants 61 syntaxin-61 syntaxin-61 syntaxin-61 syntaxin-61 syntaxin-61 syntaxin-61-like syntaxin-61 syntaxin-61 syntaxin-61 syntaxin-61 syntaxin-61-like syntaxin-61 syntaxin-61 syntaxin-61 syntaxin-61 syntaxin-61 syntaxin-61 syntaxin-61 syntaxin-61 syntaxin-61 syntaxin-61 syntaxin-61 syntaxin-61 syntaxin-61 uncharacterized LOC100273880 syntaxin-61 syntaxin-61 syntaxin-61 syntaxin-61-like syntaxin-61-like syntaxin-61 60S ribosomal protein L3 syntaxin-61 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra00440 Phosphonate and phosphinate metabolism 2
bra00564 Glycerophospholipid metabolism 2
bra04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
bra04130 SNARE interactions in vesicular transport 2
bra03040 Spliceosome 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 6
bna03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 5
ghi00562 Inositol phosphate metabolism 3
ghi04070 Phosphatidylinositol signaling system 3
ghi00040 Pentose and glucuronate interconversions 2
ghi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 5
ghi00562 Inositol phosphate metabolism 3
ghi04070 Phosphatidylinositol signaling system 3
ghi00040 Pentose and glucuronate interconversions 2
ghi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 7
ghi04141 Protein processing in endoplasmic reticulum 3
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 3
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04130 SNARE interactions in vesicular transport 2
ppo03060 Protein export 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 5
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04130 SNARE interactions in vesicular transport 3
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 3
osa04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 5
tae04130 SNARE interactions in vesicular transport 5
tae04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 2
tae04141 Protein processing in endoplasmic reticulum 2
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu04130 SNARE interactions in vesicular transport 2
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu03050 Proteasome 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00510 N-Glycan biosynthesis 2
sbi00513 Various types of N-glycan biosynthesis 2
sbi03040 Spliceosome 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04130 SNARE interactions in vesicular transport 3
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04130 SNARE interactions in vesicular transport 4
cre04144 Endocytosis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839749 103829004 103835316 103838947 106358061 106435091 106439199 107891772 107889017 107941730 102621665 100795447 100793612 100790368 100257700 18103087 7476368 11421724 11429985 101246033 102593749 107763439 107780444 4324558 103639462 100273880 123063561 123094615 123063563 123445611 123447984 8077409 100843714 100824893 5721078
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