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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   COR413IM1   COLD REGULATED 314 INNER MEMBRANE 1 
 ath-u.5   COR413IM1   COLD REGULATED 314 INNER MEMBRANE 1 
 ath-r.7   COR413IM1   COLD REGULATED 314 INNER MEMBRANE 1 
 ath-e.2   COR413IM1   COLD REGULATED 314 INNER MEMBRANE 1 
 ath-m.4.bio   COR413IM1   COLD REGULATED 314 INNER MEMBRANE 1 
 ath-m.4.hor   COR413IM1   COLD REGULATED 314 INNER MEMBRANE 1 
 ath-m.4.lig   COR413IM1   COLD REGULATED 314 INNER MEMBRANE 1 
 ath-m.4.str   COR413IM1   COLD REGULATED 314 INNER MEMBRANE 1 
 ath-m.4.tis   COR413IM1   COLD REGULATED 314 INNER MEMBRANE 1 
 ath-u.5   COR314-TM2   cold regulated 314 thylakoid membrane 2 
 bra-r.6   103840487   cold-regulated 413 inner membrane protein 2, chloroplastic 
 bna-r.1   106367399   cold-regulated 413 inner membrane protein 2, chloroplastic 
 bna-r.1   106401222   cold-regulated 413 inner membrane protein 2, chloroplastic 
 ghi-r.1   107946120   cold-regulated 413 inner membrane protein 2, chloroplastic 
 ghi-r.1   107891737   cold-regulated 413 inner membrane protein 2, chloroplastic 
 cit-r.1   102606811   cold-regulated 413 inner membrane protein 1, chloroplastic 
 gma-u.5   100306024   uncharacterized LOC100306024 
 vvi-u.5   100265908   cold-regulated 413 inner membrane protein 1, chloroplastic 
 ppo-u.5   18095285   cold-regulated 413 inner membrane protein 1, chloroplastic 
 mtr-u.5   11408207   cold-regulated 413 inner membrane protein 1, chloroplastic 
 sly-u.5   COR413IM1   cold-regulated 413 inner membrane protein 1, chloroplastic 
 sot-r.1   102590681   cold-regulated 413 inner membrane protein 2, chloroplastic 
 nta-r.1   107805169   cold-regulated 413 inner membrane protein 1, chloroplastic 
 nta-r.1   107770293   cold-regulated 413 inner membrane protein 1, chloroplastic-like 
 osa-u.5   4339637   cold-regulated 413 inner membrane protein 1, chloroplastic 
 zma-u.5   542100   cold acclimation protein COR413-TM1 
 tae-r.2   123089942   uncharacterized LOC123089942 
 hvu-r.1   123450657   cold-regulated 413 inner membrane protein 2, chloroplastic-like 
 hvu-r.1   123450678   cold-regulated 413 inner membrane protein 1, chloroplastic-like 
 sbi-r.1   8074607   cold-regulated 413 inner membrane protein 1, chloroplastic 

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Top 50 coexpressed genes to COR413IM1 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to COR413IM1 (ath-m.9 coexpression data)

CoexMap"839815"


athCOR413IM1 | Entrez gene ID : 839815      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 1 2 2 1 1 1 1 1 1 1 2 1 1 1 2 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0070417 [list] [network] cellular response to cold  (38 genes)  IEP  
GO:0042631 [list] [network] cellular response to water deprivation  (41 genes)  IEP  
GO:0009631 [list] [network] cold acclimation  (60 genes)  IEP IMP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IEP  
GO CC
GO:0009706 [list] [network] chloroplast inner membrane  (66 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  IDA ISS  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
Protein NP_564328.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  plas 4,  E.R. 1,  pero 1  (predict for NP_564328.1)
Subcellular
localization
TargetP
chlo 8,  mito 3  (predict for NP_564328.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
COR413IM1
ath-u.5
for
COR413IM1
ath-r.7
for
COR413IM1
ath-e.2
for
COR413IM1
ath-m.4.bio
for
COR413IM1
ath-m.4.hor
for
COR413IM1
ath-m.4.lig
for
COR413IM1
ath-m.4.str
for
COR413IM1
ath-m.4.tis
for
COR413IM1
ath-u.5
for
COR314-TM2
bra-r.6
for
103840487
bna-r.1
for
106367399
bna-r.1
for
106401222
ghi-r.1
for
107946120
ghi-r.1
for
107891737
cit-r.1
for
102606811
gma-u.5
for
100306024
vvi-u.5
for
100265908
ppo-u.5
for
18095285
mtr-u.5
for
11408207
sly-u.5
for
COR413IM1
sot-r.1
for
102590681
nta-r.1
for
107805169
nta-r.1
for
107770293
osa-u.5
for
4339637
zma-u.5
for
542100
tae-r.2
for
123089942
hvu-r.1
for
123450657
hvu-r.1
for
123450678
sbi-r.1
for
8074607


Ortholog ID: 8721
Species ath ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae hvu hvu sbi
Symbol COR413IM1 COR314-TM2 LOC103840487 LOC106367399 LOC106401222 LOC107946120 LOC107891737 LOC102606811 LOC100306024 LOC100265908 LOC18095285 LOC11408207 COR413IM1 LOC102590681 LOC107805169 LOC107770293 LOC4339637 LOC542100 LOC123089942 LOC123450657 LOC123450678 LOC8074607
Function* COLD REGULATED 314 INNER MEMBRANE 1 cold regulated 314 thylakoid membrane 2 cold-regulated 413 inner membrane protein 2, chloroplastic cold-regulated 413 inner membrane protein 2, chloroplastic cold-regulated 413 inner membrane protein 2, chloroplastic cold-regulated 413 inner membrane protein 2, chloroplastic cold-regulated 413 inner membrane protein 2, chloroplastic cold-regulated 413 inner membrane protein 1, chloroplastic uncharacterized LOC100306024 cold-regulated 413 inner membrane protein 1, chloroplastic cold-regulated 413 inner membrane protein 1, chloroplastic cold-regulated 413 inner membrane protein 1, chloroplastic cold-regulated 413 inner membrane protein 1, chloroplastic cold-regulated 413 inner membrane protein 2, chloroplastic cold-regulated 413 inner membrane protein 1, chloroplastic cold-regulated 413 inner membrane protein 1, chloroplastic-like cold-regulated 413 inner membrane protein 1, chloroplastic cold acclimation protein COR413-TM1 uncharacterized LOC123089942 cold-regulated 413 inner membrane protein 2, chloroplastic-like cold-regulated 413 inner membrane protein 1, chloroplastic-like cold-regulated 413 inner membrane protein 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 7
ghi00520 Amino sugar and nucleotide sugar metabolism 5
ghi01250 Biosynthesis of nucleotide sugars 5
ghi00240 Pyrimidine metabolism 3
ghi01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 6
ghi00520 Amino sugar and nucleotide sugar metabolism 4
ghi01250 Biosynthesis of nucleotide sugars 4
ghi00061 Fatty acid biosynthesis 2
ghi01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 4
cit00061 Fatty acid biosynthesis 3
cit01040 Biosynthesis of unsaturated fatty acids 3
cit01212 Fatty acid metabolism 3
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
vvi03083 Polycomb repressive complex 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 5
ppo00520 Amino sugar and nucleotide sugar metabolism 3
ppo01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 3
mtr04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
sly00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 9
sot00520 Amino sugar and nucleotide sugar metabolism 2
sot01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 9
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00460 Cyanoamino acid metabolism 3
sbi00500 Starch and sucrose metabolism 3
sbi00999 Biosynthesis of various plant secondary metabolites 3
sbi00100 Steroid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839815 839814 103840487 106367399 106401222 107946120 107891737 102606811 100306024 100265908 18095285 11408207 101262681 102590681 107805169 107770293 4339637 542100 123089942 123450657 123450678 8074607
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